BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZG01RM1.SCF screened BAC_end (935 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1321 1011 0.0 >3x_Contig1321 Length = 8217 Score = 1011 bits (510), Expect = 0.0 Identities = 615/641 (95%), Gaps = 8/641 (1%) Strand = Plus / Plus Query: 47 tgttgctcgctctcgtcattatggctgttttctatgtataattggtttctggctagaagg 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4788 tgttgctcgctctcgtcattatggctgttttctatgtataattggtttctggctagaagg 4847 Query: 107 tcatccagcaattggaagattgatttctgtttcattgcatcaccagatttgtatatggtt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4848 tcatccagcaattggaagattgatttctgtttcattgcatcaccagatttgtatatggtt 4907 Query: 167 aaaccaccctggacctgttggcgtaagttcattaagacgactgacgattcaattcgggtg 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4908 aaaccaccctggacctgttggcgtaagttcattaagacgactgacgattcaattcgggtg 4967 Query: 227 attaaatggtcaaggaatgcaagaagatctgcttcggacgagtttttcataacggcctgt 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4968 attaaatggtcaaggaatgcaagaagatctgcttcggacgagtttttcataacggcctgt 5027 Query: 287 ttggtattactatcaaaggtagtatatcgtccattggcagaattttccagcccgataaga 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5028 ttggtattactatcaaaggtagtatatcgtccattggcagaattttccagcccgataaga 5087 Query: 347 ccaccttggactgaggagaggacagtctccaatctattggacactgatctaatttggaat 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5088 ccaccttggactgaggagaggacagtctccaatctattggacactgatctaatttggaat 5147 Query: 407 agaaaatcatctgaaataacactgttattctgatcttgtgttgccaaagtgtgtctcgct 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5148 agaaaatcatctgaaataacactgttattctgatcttgtgttgccaaagtgtgtctcgct 5207 Query: 467 tgaagtgatttaggatatgctatggtggacagttctttagtttccaacccttttaacgtt 526 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 5208 tgaagtgatttaggatatgctatggtgacaagttctttagtttccaaccctttcaacgtt 5267 Query: 527 tgttcaccaagcttgacgaacatccattctatagacgataatatggtggattttcttggt 586 ||||||||||||| ||||||||||||| |||||||||||||||| ||| |||| | || Sbjct: 5268 tgttcaccaagctcgacgaacatccatcctatagacgataatat-gtgtattt--ctcgt 5324 Query: 587 cctaaaattttacccccaatgtttttccccttagccttttgcgagcgggaattttatctt 646 ||||||||| |||| ||||| | |||||| ||| ||||||||||| ||||| ||||| | Sbjct: 5325 tctaaaatttcacccacaatg-tcttccccgtaggcttttgcgagc-ggaatattatc-t 5381 Query: 647 tcagggacttgcttggtggtagctttaaaatctttttaaac 687 |||| ||||||| |||||||||| |||||||||| |||||| Sbjct: 5382 tcagtgacttgc-tggtggtagc-ttaaaatcttcttaaac 5420 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7076 Number of Sequences: 1807 Number of extensions: 7076 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 935 length of database: 10,358,551 effective HSP length: 16 effective length of query: 919 effective length of database: 10,329,639 effective search space: 9492938241 effective search space used: 9492938241 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)