BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC30ZG03RM1.SCF screened BAC_end
         (897 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1754                                                        1554   0.0  

>3x_Contig1754 
          Length = 26052

 Score = 1554 bits (784), Expect = 0.0
 Identities = 836/847 (98%), Gaps = 6/847 (0%)
 Strand = Plus / Plus

                                                                         
Query: 49    aacatagacaagatgaacatgagacagcgacagcaaaaattccagttagagcatgattca 108
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14549 aacatagacaagatgaacatgagacagcgacagcaaaaattccagttagagcatgattca 14608

                                                                         
Query: 109   atattcagaatggatttccacgttccaagcagagccttagctcacttaatgtttggtgac 168
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14609 atattcagaatggatttccacgttccaagcagagccttagctcacttaatgtttggtgac 14668

                                                                         
Query: 169   aaatcaacagttttccacgaatgtacgtttttatctagatcgaagaccaaacatgatgct 228
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14669 aaatcaacagttttccacgaatgtacgtttttatctagatcgaagaccaaacatgatgct 14728

                                                                         
Query: 229   gtaggtgcgtggttcatcaatccagagactaaagagctcgtacggaagatgagatttcgt 288
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14729 gtaggtgcgtggttcatcaatccagagactaaagagctcgtacggaagatgagatttcgt 14788

                                                                         
Query: 289   ctaagactagccagagcacttatttctgataataaagttcatcggtcgacgaacaccgat 348
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14789 ctaagactagccagagcacttatttctgataataaagttcatcggtcgacgaacaccgat 14848

                                                                         
Query: 349   ttcagttacatggatattttacagactctaacaaaaacgtctgagaatttttattatgag 408
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14849 ttcagttacatggatattttacagactctaacaaaaacgtctgagaatttttattatgag 14908

                                                                         
Query: 409   attgatcaaaagacaggcttcttttctcttcctttaactaaattattttgcattgagacg 468
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14909 attgatcaaaagacaggcttcttttctcttcctttaactaaattattttgcattgagacg 14968

                                                                         
Query: 469   aagtatgtgataatcgataaccctaaaaatgactataacaccaaaattaggaaaaccccg 528
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14969 aagtatgtgataatcgataaccctaaaaatgactataacaccaaaattaggaaaaccccg 15028

                                                                         
Query: 529   ggttcatcttgttcattatacacttattacaacgttatttttgtgaattcaaactcatta 588
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15029 ggttcatcttgttcattatacacttattacaacgttatttttgtgaattcaaactcatta 15088

                                                                         
Query: 589   aaacctgtatcatcattaaactatatcgataaattcatcaaggcaactgttttatcgatt 648
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15089 aaacctgtatcatcattaaactatatcgataaattcatcaaggcaactgttttatcgatt 15148

                                                                         
Query: 649   ttggggaatgaatcgcgaattttgaaacatgttctatcgacatatgttagcaagcttgga 708
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15149 ttggggaatgaatcgcgaattttgaaacatgttctatcgacatatgttagcaagcttgga 15208

                                                                         
Query: 709   aacagctcaaagattgtcaaggcaataagattgggtggacaaattggtgttgctaaccaa 768
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15209 aacagctcaaagattgtcaaggcaataagattgggtggacaaattggtgttgctaaccaa 15268

                                                                         
Query: 769   gcgactcctgcagatgccgaatatatgatcaactccatatctacccaggttgtgtataca 828
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 15269 gcgactcctgcagatgccgaatatatgatcaactccatatctaaccaggttgtgtataca 15328

                                                                         
Query: 829   aaatgtttgattt--caactagccatcaagt-gat-ttcttattctgg-ccaaa-tatgt 882
             |||   |||||||   ||||||||||||||| ||| |||||||||||| ||||| |||||
Sbjct: 15329 aaaatgttgattttcaaactagccatcaagtggatattcttattctggtccaaactatgt 15388

                    
Query: 883   ataaacg 889
             |||||||
Sbjct: 15389 ataaacg 15395


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6689
Number of Sequences: 1807
Number of extensions: 6689
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 897
length of database: 10,358,551
effective HSP length: 16
effective length of query: 881
effective length of database: 10,329,639
effective search space: 9100411959
effective search space used: 9100411959
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)