BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC30ZG07FM1.SCF screened BAC_end
         (931 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1464                                                        1310   0.0  

>3x_Contig1464 
          Length = 11693

 Score = 1310 bits (661), Expect = 0.0
 Identities = 739/759 (97%), Gaps = 5/759 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   ttgcaccgtgaaccacaatacaacggcggactttcatatacagggaaactaagactataa 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9451 ttgcaccgtgaaccacaatacaacggcggactttcatatacagggaaactaagactataa 9392

                                                                        
Query: 146  aggaggtgaatacattgtctggtcagtttcaaattgttaagtgaaagtagcaaacgtgaa 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9391 aggaggtgaatacattgtctggtcagtttcaaattgttaagtgaaagtagcaaacgtgaa 9332

                                                                        
Query: 206  agaagacctcggtaggcctggtattaggggaattggacctggagagttgcgcgatgaacc 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9331 agaagacctcggtaggcctggtattaggggaattggacctggagagttgcgcgatgaacc 9272

                                                                        
Query: 266  tatgacactagaaaaagaacttatcttgaggcttaatgtgggtcataacactgtgataag 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9271 tatgacactagaaaaagaacttatcttgaggcttaatgtgggtcataacactgtgataag 9212

                                                                        
Query: 326  agacgtccagttgtggcgtgaatttgaggacggtgatggccaaattgcagtgaaaaattg 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9211 agacgtccagttgtggcgtgaatttgaggacggtgatggccaaattgcagtgaaaaattg 9152

                                                                        
Query: 386  tctggcagaagttgttggaatggtcaacattgataagctgccgttttggctcaatagagg 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9151 tctggcagaagttgttggaatggtcaacattgataagctgccgttttggctcaatagagg 9092

                                                                        
Query: 446  tcaacggtaccaatgcttcactactagcgagaccagcgtcaattatttcagagcgaagtt 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9091 tcaacggtaccaatgcttcactactagcgagaccagcgtcaattatttcagagcgaagtt 9032

                                                                        
Query: 506  gatgagacaacgacacaggaatcgaggaattgtatgtaaagtaacgggatcccaagtgtt 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9031 gatgagacaacgacacaggaatcgaggaattgtatgtaaagtaacgggatcccaagtgtt 8972

                                                                        
Query: 566  gacgaaagagcaattcgaatattttctattctacaagcgtttgaagaccgatantaacgc 625
            |||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||
Sbjct: 8971 gacgaaagagcaattcgaatatttcctattctacaagcgtttgaagaccgatataaacgc 8912

                                                                        
Query: 626  gtctttcgaaattgaatcgatggtacttcacttatcgact-aacacgaacttgataaggn 684
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  
Sbjct: 8911 gtctttcgaaattgaatcgatggtacttcacttatcgactaaacacgaacttgataagaa 8852

                                                                        
Query: 685  attgataccggtatcagccgacgaacttacatctgttgtgccaagtaacgctggaacaac 744
            |||||||||| ||||||||||||||||   ||||||||||||||||||||||||| ||||
Sbjct: 8851 attgataccgttatcagccgacgaactacaatctgttgtgccaagtaacgctggagcaac 8792

                                                                        
Query: 745  gatgtcgatcgaatcgattctagagaagaacaaaacgtca-cgaatactgaaaagtaact 803
            ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 8791 gatgtcgatcgaatcgattctagagaagaac-aaacgtcagcgaatactgaaaagtaact 8733

                                                   
Query: 804  tgtttgacaaaacaagttttgcttaacggatcaacagca 842
             | ||||  |||||||| ||||| ||| |||||||||||
Sbjct: 8732 cg-ttgaacaaacaagtcttgctcaac-gatcaacagca 8696


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5590
Number of Sequences: 1807
Number of extensions: 5590
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)