BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZH06FM1.SCF screened BAC_end (926 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig689 1332 0.0 >3x_Contig689 Length = 3037 Score = 1332 bits (672), Expect = 0.0 Identities = 741/760 (97%), Gaps = 3/760 (0%) Strand = Plus / Minus Query: 89 tgtcgacc-gtgaaataataggatctgccacaccataggaggcattctcgtaaagagaaa 147 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1917 tgtcgaccagtgaaataataggatctgccacaccataggaggcattctcgtaaagagaaa 1858 Query: 148 tgatattgtacttctcgaggttaactacagtatgttcatcattaccgtcatcgtagaatg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1857 tgatattgtacttctcgaggttaactacagtatgttcatcattaccgtcatcgtagaatg 1798 Query: 208 taaggttagatacaaattcattatgataggtatgtgaaagcacataaggtttgtcttcta 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1797 taaggttagatacaaattcattatgataggtatgtgaaagcacataaggtttgtcttcta 1738 Query: 268 aataaagaagactcgccacttcatttttggttgtagcgttaacggcttggtgtagatggc 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1737 aataaagaagactcgccacttcatttttggttgtagcgttaacggcttggtgtagatggc 1678 Query: 328 ttggatttctgtcaacgacattaatatcaaacgtagagtcaaatatgttggatttcaatt 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1677 ttggatttctgtcaacgacattaatatcaaacgtagagtcaaatatgttggatttcaatt 1618 Query: 388 ccttgtggttgatacttgaagcagggttagtccattgtttgatgttaccagaaatgatcc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1617 ccttgtggttgatacttgaagcagggttagtccattgtttgatgttaccagaaatgatcc 1558 Query: 448 agttctcgcctatagtgctcttatatttatcgtccaaactggatacaatttccatttgta 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1557 agttctcgcctatagtgctcttatatttatcgtccaaactggatacaatttccatttgta 1498 Query: 508 attcccaaggtttaccatccttcaagagtgggataaaaggtgtaagatcgacgaatagac 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1497 attcccaaggtttaccatccttcaagagtgggataaaaggtgtaagatcgacgaatagac 1438 Query: 568 tttcaaggtcaaaggcatcgataccaacacaaggtctccaaagagcatgcgagaacccac 627 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1437 tttcaaggtcaaaggcatcgataccaacacaaggtctccaaagagcaggcgagaacccac 1378 Query: 628 ctgtgttaatgacatgagtaggaattaccgttgaaactaaatagtcttgttcaccatcat 687 | |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1377 cggtgtaaatgacaggagtaggaattaccgttgaaactaaatagtcatgttcaccatcat 1318 Query: 688 atatgaagactttcaaagcacgtagggggaccgtgacccatgacttttcgc-aggcattt 746 ||| |||||||||||||||||||| ||||||||||||||||||||| |||| || ||||| Sbjct: 1317 ataagaagactttcaaagcacgta-ggggaccgtgacccatgacttctcgcaagccattt 1259 Query: 747 ttgaacttggatacatatttgtccaacacattaccgtaccagaactctttacctgcgtta 806 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 1258 ttgaacttggatacatatttgtccaacacattaccgtaccagaactcttcagctgcgtta 1199 Query: 807 cctggaatgaaaactttcaaaatggcttgctttaagtcat 846 |||| |||||||||| ||| ||||| |||| |||||||| Sbjct: 1198 cctgagatgaaaacttccaagatggcatgctctaagtcat 1159 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6223 Number of Sequences: 1807 Number of extensions: 6223 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 926 length of database: 10,358,551 effective HSP length: 16 effective length of query: 910 effective length of database: 10,329,639 effective search space: 9399971490 effective search space used: 9399971490 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)