BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZH07FM1.SCF screened BAC_end (945 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig331 928 0.0 >3x_Contig331 Length = 1863 Score = 928 bits (468), Expect = 0.0 Identities = 583/608 (95%), Gaps = 10/608 (1%) Strand = Plus / Minus Query: 88 tctgcaccatattgaaatcc-cactattgatagatcttgtatgttctgagagagatgtta 146 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 801 tctgcaccatattgaaatccacactattgatagatcttgtatgttctgagagagatgtta 742 Query: 147 caactggattgtctatcgctgatgtcttattaatatcgtaaatcgcaacagacgttgaag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 caactggattgtctatcgctgatgtcttattaatatcgtaaatcgcaacagacgttgaag 682 Query: 207 taccacaaattgctacatagtttttgtgattgtaaaagccagctttaacatcagatatgg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 taccacaaattgctacatagtttttgtgattgtaaaagccagctttaacatcagatatgg 622 Query: 267 ttgaaattttttttgttgttctccgtagtgtcgatgaagtgttcttcgtgatcccagtat 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 ttgaaattttttttgttgttctccgtagtgtcgatgaagtgttcttcgtgatcccagtat 562 Query: 327 ttgtcttcgctgtctgtaagaaatcatgtacattagttatcgtcttagaatcttcatcga 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 ttgtcttcgctgtctgtaagaaatcatgtacattagttatcgtcttagaatcttcatcga 502 Query: 387 aagtgtaaatacctaaatggctttttcctgctattatcaaggatctgctctccggtgaat 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 aagtgtaaatacctaaatggctttttcctgctattatcaaggatctgctctccggtgaat 442 Query: 447 tgattttatctatacttgagacttcctttttcgatactcagagagtatttagcgccgtgg 506 |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 441 tgattttatctatacttgagacttcc-tttccgatactcagagagtatttagcgccgtgg 383 Query: 507 aaagttctacgtttgtcaaa-gaactttcagaaggccttcatcttgcatttgattctttt 565 |||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| | Sbjct: 382 aaagttctacgtttgtcaaatgaactttcagaaggtctccatcttgcatttgattcttct 323 Query: 566 tcattaagagagctttcttggtccaacattttcccgtcccattaaaactgtaagtagtgc 625 |||||||||||||| || |||||||||| |||||||| |||| ||||||| | | ||||| Sbjct: 322 tcattaagagagctctc-tggtccaaca-tttcccgtaccatcaaaactgaagggagtgc 265 Query: 626 ggcttttttggtttaatcttaggtgaatatccctaaagggtgaagtttccaaaacctggt 685 ||| | | ||||||| |||||||| |||| |||||| ||||||| ||||||||||| || Sbjct: 264 ggc-tatctggtttatacttaggtg-atat-cctaaaaggtgaag-ttccaaaacct-gt 210 Query: 686 gttgtact 693 |||||||| Sbjct: 209 gttgtact 202 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8741 Number of Sequences: 1807 Number of extensions: 8741 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 945 length of database: 10,358,551 effective HSP length: 16 effective length of query: 929 effective length of database: 10,329,639 effective search space: 9596234631 effective search space used: 9596234631 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)