BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZA02FM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1358 837 0.0 3x_Contig1781 109 1e-23 >3x_Contig1358 Length = 7912 Score = 837 bits (422), Expect = 0.0 Identities = 422/422 (100%) Strand = Plus / Plus Query: 87 tattacagtcaccggaaccaaatgatccacaggatgcacaagttgccaaacattatttga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7479 tattacagtcaccggaaccaaatgatccacaggatgcacaagttgccaaacattatttga 7538 Query: 147 ctgacaaaaaatccttcgatgagactgcagcattatggacaaggacttatgcttctagta 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7539 ctgacaaaaaatccttcgatgagactgcagcattatggacaaggacttatgcttctagta 7598 Query: 207 acggaggggataatggtaccaacagtctaggcaaaggtaccgaagagaatgttcaagaac 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7599 acggaggggataatggtaccaacagtctaggcaaaggtaccgaagagaatgttcaagaac 7658 Query: 267 ttgatgaagcagatctgtacggaattgatcaagatttggtgacgcagtttgtcaatcaag 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7659 ttgatgaagcagatctgtacggaattgatcaagatttggtgacgcagtttgtcaatcaag 7718 Query: 327 gatttgacagacaaaacgttattgaagttttaaagaggttaaacatcaagagcatgagca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7719 gatttgacagacaaaacgttattgaagttttaaagaggttaaacatcaagagcatgagca 7778 Query: 387 tggaagataatgaaactgccaataaaatcttagaagagcttctaaaagaataagtgttcc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7779 tggaagataatgaaactgccaataaaatcttagaagagcttctaaaagaataagtgttcc 7838 Query: 447 atgtcaagaagttcagacttgaacatttcaggaaagaaggacaagacaagacacacacac 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7839 atgtcaagaagttcagacttgaacatttcaggaaagaaggacaagacaagacacacacac 7898 Query: 507 ac 508 || Sbjct: 7899 ac 7900 >3x_Contig1781 Length = 20717 Score = 109 bits (55), Expect = 1e-23 Identities = 100/110 (90%), Gaps = 4/110 (3%) Strand = Plus / Minus Query: 809 ttcagcttccaaattaatgggctctttcttgatttctcttcctttagaatgttacaanat 868 |||| ||||||||||||||| ||||||||||||||||||||||| ||||||| || | || Sbjct: 20710 ttcaccttccaaattaatgg-ctctttcttgatttctcttcctt-agaatgt-accagat 20654 Query: 869 gacgattgcaattcgatggagcatgggagaacgatagcacattttgaacg 918 |||||||||||| |||||||||| |||||||||||||||| |||||||| Sbjct: 20653 gacgattgcaat-cgatggagcaatggagaacgatagcacaatttgaacg 20605 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7985 Number of Sequences: 1807 Number of extensions: 7985 Number of successful extensions: 191 Number of sequences better than 1.0e-20: 2 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)