BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZA06FM1.SCF screened BAC_end (895 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1794 509 e-144 >3x_Contig1794 Length = 36744 Score = 509 bits (257), Expect = e-144 Identities = 291/299 (97%), Gaps = 3/299 (1%) Strand = Plus / Plus Query: 86 cgccatttttgtagctctttcctcttcttcaaagatctccatttcgttagcttccatatc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29680 cgccatttttgtagctctttcctcttcttcaaagatctccatttcgttagcttccatatc 29739 Query: 146 gtcgtcatcatctgaatcaaagtatttccttttactacctttgttgaagatagaccaaat 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29740 gtcgtcatcatctgaatcaaagtatttccttttactacctttgttgaagatagaccaaat 29799 Query: 206 ttcatctctatcgtacggttgtgatttggagccttgttcacactcgtctaaatcatcatc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29800 ttcatctctatcgtacggttgtgatttggagccttgttcacactcgtctaaatcatcatc 29859 Query: 266 ttcaat-aagtctgagagatcttcgtcattctcactgtcataatgttgatctccgngnct 324 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 29860 ttcaataaagtctgagagatcttcgtcattctcactgtcataatgttgatctccgtgtct 29919 Query: 325 tgccataatttgtttccttttctttaagttttaaactccttcccaagctttttgtttgg 383 ||||||||||||||| |||||||||||||||| |||| |||| ||||||||| |||||| Sbjct: 29920 tgccataatttgttt-cttttctttaagtttt-aacttcttcgcaagcttttcgtttgg 29976 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 27,984 Number of Sequences: 1807 Number of extensions: 27984 Number of successful extensions: 3730 Number of sequences better than 1.0e-20: 1 length of query: 895 length of database: 10,358,551 effective HSP length: 16 effective length of query: 879 effective length of database: 10,329,639 effective search space: 9079752681 effective search space used: 9079752681 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)