BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZA06RM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1588 977 0.0 >3x_Contig1588 Length = 14692 Score = 977 bits (493), Expect = 0.0 Identities = 546/562 (97%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 195 cttcttcaccaggtaagatgattagtagagattcaccttcgcaaccagcacgagcagtac 254 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 14589 cttcttcaccaggtaagaggaatagtagagattcaccttcgcaaccagcacgagcagtac 14530 Query: 255 gcccgattctgtgtaaatggtcttctactgcaaacggtggatccatttctataacagtac 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14529 gcccgattctgtgtaaatggtcttctactgcaaacggtggatccatttctataacagtac 14470 Query: 315 tcacatggggtaaatcaagacctctggatgcaacatcggtacaaaataagatcagatgct 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14469 tcacatggggtaaatcaagacctctggatgcaacatcggtacaaaataagatcagatgct 14410 Query: 375 tacccttggtggcatcgttattcgtggcgaagtgttttaaggttgcggttcttgtttgtt 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14409 tacccttggtggcatcgttattcgtggcgaagtgttttaaggttgcggttcttgtttgtt 14350 Query: 435 gcgataaggacccatgcaacttgtaacatatgacgtttggatcgtccgtgtcgttgaaac 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14349 gcgataaggacccatgcaacttgtaacatatgacgtttggatcgtccgtgtcgttgaaac 14290 Query: 495 atggaagtatgctgttcccctttgtgagaagccttgcggtatctncaacgagacctctat 554 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 14289 atggaagtatgctgttcccctttgtgagaagccttgcggtatctccaacgagacctctat 14230 Query: 555 gattcccatcatgcgatgaanacacttcgtagtggaaatctacactatcagaacaagata 614 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 14229 gattcccatcatgcgatgaaaacacttcgtagtggaaatctacactatcagaacaagata 14170 Query: 615 taaacacaatggttctttgtacgtctgattttgatccttctttantatgcctttgagtta 674 |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||| Sbjct: 14169 aaaacacaatggttcttgttacgtctgattttgatccttctttataatgcttttgagtta 14110 Query: 675 tagttgtcaaagatcccgcttgaataactagccttagctttgggtggcactttgacaatc 734 |||||||||||||||||||| || ||||||||||||||||| ||||||||| |||||||| Sbjct: 14109 tagttgtcaaagatcccgctagagtaactagccttagcttt-ggtggcactatgacaatc 14051 Query: 735 ttttggagtaatttgatctggt 756 ||||| ||||| |||||||||| Sbjct: 14050 ttttgaagtaa-ttgatctggt 14030 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6115 Number of Sequences: 1807 Number of extensions: 6115 Number of successful extensions: 33 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)