BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZA09RM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1666 1219 0.0 >3x_Contig1666 Length = 16162 Score = 1219 bits (615), Expect = 0.0 Identities = 721/753 (95%), Gaps = 3/753 (0%) Strand = Plus / Plus Query: 158 tttttgacatcggtaagaatcgcaactgcatcgatatctttgctgagggagtggctttca 217 ||||||| || ||||||||| | || || || ||||| |||| ||||||||||| ||| | Sbjct: 89 tttttgaaataggtaagaatagaaaatgaatagatatatttgatgagggagtggatttaa 148 Query: 218 tctagtaacagcaaacacatcaatgcaagatgtacatcctgaaaacaccaaatggtcgga 277 | |||||| || ||| |||| ||||||||||||||| ||||||||||||||||||||||| Sbjct: 149 tatagtaaaagaaaaaacataaatgcaagatgtaca-cctgaaaacaccaaatggtcgga 207 Query: 278 caaaaacttgaacttctcaaaaggacaatttacaatagcagtcaatcctaagtgtgcatg 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 caaaaacttgaacttctcaaaaggacaatttacaatagcagtcaatcctaagtgtgcatg 267 Query: 338 ctccagtataaaaga-cacttgggctggtaatattgatgcaacaactttcttcagtggat 396 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 ctccagtataaaagagcacttgggctggtaatattgatgcaacaactttcttcagtggat 327 Query: 397 aagtcaaatttaagtaatctgctatagctgtcttggtggaatttgttgcagaattaaaca 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 aagtcaaatttaagtaatctgctatagctgtcttggtggaatttgttgcagaattaaaca 387 Query: 457 aaggcagattgtctggaggatgtgtggttacatagtgtttatgataccacgaatagtgaa 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 aaggcagattgtctggaggatgtgtggttacatagtgtttatgataccacgaatagtgaa 447 Query: 517 ccaaacagatactatagtgataattaaattccacaaattgggtcacaggttgagtgaaca 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 ccaaacagatactatagtgataattaaattccacaaattgggtcacaggttgagtgaaca 507 Query: 577 aataattccattgttctaaccaacctttaagtttagacaacactgtattcaaaggttgtt 636 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 aataattccattgttctaaccaacctttaagtttagacaacactgtattcaaaggttgtt 567 Query: 637 ggtcagatatgtcaaagaactccaaacttcgaataaacttataaactatccgagtgagtt 696 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 ggtcagatatgtcaaagaactccaaacttcgaataaacttataaactatccgagtgagtt 627 Query: 697 caatctctgccaccattctttcgtcataattcgtggaatgcggcagttccaaagtgaagt 756 |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | Sbjct: 628 caatctctgccaccattcttccgtcaaaattcgtggaatgcggcagttccaaagtgagtt 687 Query: 757 tacacatttctaaaactctatcgtcaattgtacacattctaccgnatgccacacagttgt 816 |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 688 tacacatttctaaacttctatcgtcaattgtacacattctaccggatgccacacagttg- 746 Query: 817 tttatatggcaatgacatagatggntccaaagtctcgcaaacgataattgttcgaattct 876 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 747 tttatatggcaatgacatagatggttccaaagtctcgcagacgataattgttcgaattct 806 Query: 877 tctgtttctttcgacacgctattgtttaatgtg 909 |||||||||| ||||||||||||| |||||| Sbjct: 807 tctgtttcttcgaacacgctattgttaaatgtg 839 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6367 Number of Sequences: 1807 Number of extensions: 6367 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)