BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZA12RM1.SCF screened BAC_end (894 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1803 1344 0.0 >3x_Contig1803 Length = 52241 Score = 1344 bits (678), Expect = 0.0 Identities = 780/806 (96%), Gaps = 6/806 (0%) Strand = Plus / Minus Query: 48 ttgctgcgaagaaaactctactggatctaaagaaccttccgaagtgctcttggttgattt 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14829 ttgctgcgaagaaaactctactggatctaaagaaccttccgaagtgctcttggttgattt 14770 Query: 108 ttttcgttctttacgttctttacgagattttaggtgttttgagagctcgaatagcattgc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14769 ttttcgttctttacgttctttacgagattttaggtgttttgagagctcgaatagcattgc 14710 Query: 168 gaatgggttcttcgggtcaccaaacccacatagttgtagaatgtgcgattgagaaaatag 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14709 gaatgggttcttcgggtcaccaaacccacatagttgtagaatgtgcgattgagaaaatag 14650 Query: 228 tgaggaatgtctaaagaaatgttttaatctttctgcatcctgaatgaaaatcaaatttgg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14649 tgaggaatgtctaaagaaatgttttaatctttctgcatcctgaatgaaaatcaaatttgg 14590 Query: 288 atcaaagaagttcccagaagaggagacaccaaatttgtgttgaaagtaatgtatgacgac 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14589 atcaaagaagttcccagaagaggagacaccaaatttgtgttgaaagtaatgtatgacgac 14530 Query: 348 attttgtaattctgatgattccagaaagcttggaagtaacatcacttctgtgtgctttaa 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14529 attttgtaattctgatgattccagaaagcttggaagtaacatcacttctgtgtgctttaa 14470 Query: 408 gtagtcaacaatgtgatttgtcctgtttccactgctgtcacgttcagcaaaagctctttg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14469 gtagtcaacaatgtgatttgtcctgtttccactgctgtcacgttcagcaaaagctctttg 14410 Query: 468 gtagatgttatctatgactaattgcatatactgcggggaaggaacaaaaatgtcttcaca 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14409 gtagatgttatctatgactaattgcatatactgcggggaaggaacaaaaatgtcttcaca 14350 Query: 528 gaaaacagattttcccaaattgacaaatgcttccaaagtgttttggtgaactgttgacat 587 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 14349 gaaaacagattttcccaaattgacaaatgcttccaaagtgttttgttgaactgttgacat 14290 Query: 588 atgataatatagcttcccatggccaaaagtgaatttcaagctttctctgtaccaatgctc 647 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 14289 atgataatatagcttcccatggccaaaagtgaatttcaggctttctctgtaccaatgctc 14230 Query: 648 agcactaagttttcaatcaacgaattccgaaagatatagagcgattgccattctggat-a 706 |||||||||||| |||||||||||| | ||| |||||||||||||||||||||||||| | Sbjct: 14229 agcactaagtttccaatcaacgaatccggaaggatatagagcgattgccattctggataa 14170 Query: 707 attaccaagcctttcta-cccggggatggagtacttttggggttaattcttcaacat-tt 764 || |||||||||||||| || |||||||||||||||| ||||| ||| || |||||| || Sbjct: 14169 atcaccaagcctttctagccaggggatggagtactttgggggtaaatcctccaacatatt 14110 Query: 765 tgattatgcaataaattcct-tgcgatgaattttcagc-aacctcgggatccatgaaatt 822 |||| ||||||||||| | | ||||||||||| |||| ||||||||||||||||||||| Sbjct: 14109 tgataatgcaataaatacgtatgcgatgaattgacagcaaacctcgggatccatgaaatt 14050 Query: 823 tggaaattttttc-aaacatccaaaa 847 || ||| || ||| |||||||||||| Sbjct: 14049 tgaaaaattcttcaaaacatccaaaa 14024 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,747 Number of Sequences: 1807 Number of extensions: 14747 Number of successful extensions: 237 Number of sequences better than 1.0e-20: 1 length of query: 894 length of database: 10,358,551 effective HSP length: 16 effective length of query: 878 effective length of database: 10,329,639 effective search space: 9069423042 effective search space used: 9069423042 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)