BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZB01RM1.SCF screened BAC_end (876 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig739 1398 0.0 >3x_Contig739 Length = 2501 Score = 1398 bits (705), Expect = 0.0 Identities = 803/828 (96%), Gaps = 6/828 (0%) Strand = Plus / Plus Query: 49 tatttgactcacgatatatcagagtaccccatcgaggtgaggaggcagatgttgtttttg 108 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 tatttgactcacgatataacagagtaccccatcgaggtgaggaggcagatgttgtttttg 687 Query: 109 gagacttttttgctttgctcgtcaacaaataagaccacatacgtttgtgccaggtgtgtg 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 gagacttttttgctttgctcgtcaacaaataagaccacatacgtttgtgccaggtgtgtg 747 Query: 169 aaaagagaacaacgtagagctgcgagacggaaatctggtgtaagtgattttttgctttgg 228 |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 748 aaaagagaacaacgtagagctgcgagacggaaatctggtgtaagtgataatctgctttgg 807 Query: 229 tgtaacaacgataacaagagagctattgtttttaatagcaaacaagtcctcttaatgaaa 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 tgtaacaacgataacaagagagctattgtttttaatagcaaacaagtcctcttaatgaaa 867 Query: 289 gaacatgaatgcaatgaaaactctaaaaatttctctttgatgacccgtatcgtatgttac 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 gaacatgaatgcaatgaaaactctaaaaatttctctttgatgacccgtatcgtatgttac 927 Query: 349 tgcagacatcataaggagccagaaggtttcaaggtgttgatggttctacgagatgcagat 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 tgcagacatcataaggagccagaaggtttcaaggtgttgatggttctacgagatgcagat 987 Query: 409 gataatatcttggcaagaacagtgacaaacagtattgttattatggataaaaagacgaca 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 gataatatcttggcaagaacagtgacaaacagtattgttattatggataaaaagacgaca 1047 Query: 469 agcaagggtaaatctagtgacaaccgtaccagcgatggttatgtcaaggatgaagattct 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 agcaagggtaaatctagtgacaaccgtaccagcgatggttatgtcaaggatgaagattct 1107 Query: 529 atgacaggacaagccagcgattatagtaactccgaatcctacgtgagtatgaaagctgag 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108 atgacaggacaagccagcgattatagtaactccgaatcctacgtgagtatgaaagctgag 1167 Query: 589 gactcttcagcgccagtacggctttctataccaaaaagtatgccctctccaacttccatt 648 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1168 gactcttcagcgccagtacggctttctataccaaaaggtatgccctctccaacttccatt 1227 Query: 649 acgggagattcttcagaaaatgtccataccgaccatggtccagtaaacccgactactnct 708 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1228 acggaggattcttcagaaaatgtccataccgaccatggtccagtaaacccgactactcct 1287 Query: 709 ggctttttccactcttttgcagctgcctctggcaagaacgaatggtttttaaacgttcaa 768 |||||||||||||||| |||||||||||| ||||||||||||||| || ||||||| ||| Sbjct: 1288 ggctttttccactcttctgcagctgcctc-ggcaagaacgaatgg-ttataaacgtccaa 1345 Query: 769 gaagctctttagacggtcccaataagtccagaacgctcgttggcttattttttcaacctt 828 |||||||| |||||||| ||||||||| |||||||||||||| | || || |||||||| Sbjct: 1346 gaagctctatagacggtaccaataagt-cagaacgctcgttgtc-taattcttcaacctc 1403 Query: 829 a-taactacagcttttggatgtttcttcttcgatttctggtccccctc 875 | |||||||||| ||||||||||||||||||||| |||||||| |||| Sbjct: 1404 agtaactacagc-tttggatgtttcttcttcgatatctggtccacctc 1450 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5770 Number of Sequences: 1807 Number of extensions: 5770 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 876 length of database: 10,358,551 effective HSP length: 16 effective length of query: 860 effective length of database: 10,329,639 effective search space: 8883489540 effective search space used: 8883489540 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)