BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC31ZB01RM1.SCF screened BAC_end
         (876 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig739                                                         1398   0.0  

>3x_Contig739 
          Length = 2501

 Score = 1398 bits (705), Expect = 0.0
 Identities = 803/828 (96%), Gaps = 6/828 (0%)
 Strand = Plus / Plus

                                                                        
Query: 49   tatttgactcacgatatatcagagtaccccatcgaggtgaggaggcagatgttgtttttg 108
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 628  tatttgactcacgatataacagagtaccccatcgaggtgaggaggcagatgttgtttttg 687

                                                                        
Query: 109  gagacttttttgctttgctcgtcaacaaataagaccacatacgtttgtgccaggtgtgtg 168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688  gagacttttttgctttgctcgtcaacaaataagaccacatacgtttgtgccaggtgtgtg 747

                                                                        
Query: 169  aaaagagaacaacgtagagctgcgagacggaaatctggtgtaagtgattttttgctttgg 228
            ||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||
Sbjct: 748  aaaagagaacaacgtagagctgcgagacggaaatctggtgtaagtgataatctgctttgg 807

                                                                        
Query: 229  tgtaacaacgataacaagagagctattgtttttaatagcaaacaagtcctcttaatgaaa 288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808  tgtaacaacgataacaagagagctattgtttttaatagcaaacaagtcctcttaatgaaa 867

                                                                        
Query: 289  gaacatgaatgcaatgaaaactctaaaaatttctctttgatgacccgtatcgtatgttac 348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868  gaacatgaatgcaatgaaaactctaaaaatttctctttgatgacccgtatcgtatgttac 927

                                                                        
Query: 349  tgcagacatcataaggagccagaaggtttcaaggtgttgatggttctacgagatgcagat 408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928  tgcagacatcataaggagccagaaggtttcaaggtgttgatggttctacgagatgcagat 987

                                                                        
Query: 409  gataatatcttggcaagaacagtgacaaacagtattgttattatggataaaaagacgaca 468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988  gataatatcttggcaagaacagtgacaaacagtattgttattatggataaaaagacgaca 1047

                                                                        
Query: 469  agcaagggtaaatctagtgacaaccgtaccagcgatggttatgtcaaggatgaagattct 528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 agcaagggtaaatctagtgacaaccgtaccagcgatggttatgtcaaggatgaagattct 1107

                                                                        
Query: 529  atgacaggacaagccagcgattatagtaactccgaatcctacgtgagtatgaaagctgag 588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 atgacaggacaagccagcgattatagtaactccgaatcctacgtgagtatgaaagctgag 1167

                                                                        
Query: 589  gactcttcagcgccagtacggctttctataccaaaaagtatgccctctccaacttccatt 648
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1168 gactcttcagcgccagtacggctttctataccaaaaggtatgccctctccaacttccatt 1227

                                                                        
Query: 649  acgggagattcttcagaaaatgtccataccgaccatggtccagtaaacccgactactnct 708
            ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1228 acggaggattcttcagaaaatgtccataccgaccatggtccagtaaacccgactactcct 1287

                                                                        
Query: 709  ggctttttccactcttttgcagctgcctctggcaagaacgaatggtttttaaacgttcaa 768
            |||||||||||||||| |||||||||||| ||||||||||||||| || ||||||| |||
Sbjct: 1288 ggctttttccactcttctgcagctgcctc-ggcaagaacgaatgg-ttataaacgtccaa 1345

                                                                        
Query: 769  gaagctctttagacggtcccaataagtccagaacgctcgttggcttattttttcaacctt 828
            |||||||| |||||||| ||||||||| |||||||||||||| | || || |||||||| 
Sbjct: 1346 gaagctctatagacggtaccaataagt-cagaacgctcgttgtc-taattcttcaacctc 1403

                                                            
Query: 829  a-taactacagcttttggatgtttcttcttcgatttctggtccccctc 875
            | |||||||||| ||||||||||||||||||||| |||||||| ||||
Sbjct: 1404 agtaactacagc-tttggatgtttcttcttcgatatctggtccacctc 1450


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5770
Number of Sequences: 1807
Number of extensions: 5770
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)