BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZB02FM1.SCF screened BAC_end (917 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1698 1528 0.0 >3x_Contig1698 Length = 21001 Score = 1528 bits (771), Expect = 0.0 Identities = 801/807 (99%), Gaps = 3/807 (0%) Strand = Plus / Plus Query: 86 tgatcagtggaataaattggagttttcaaacgatggtaaatatttgttgcttgcgtcgtc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3666 tgatcagtggaataaattggagttttcaaacgatggtaaatatttgttgcttgcgtcgtc 3725 Query: 146 cgctggaaaacatttgatcatggattccttcgatggtacacagttatttgaattatcagg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3726 cgctggaaaacatttgatcatggattccttcgatggtacacagttatttgaattatcagg 3785 Query: 206 aactaaacctttcccattgagagagttcatggattctggatccgcaacgttcactccaga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3786 aactaaacctttcccattgagagagttcatggattctggatccgcaacgttcactccaga 3845 Query: 266 tggacgcattacattgggaactgattacactgggaagatcgcgatatggaaccacgcaga 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3846 tggacgcattacattgggaactgattacactgggaagatcgcgatatggaaccacgcaga 3905 Query: 326 cttcatcagtggtaggacgctcaaacctcaaggatttattaacgccgcaccaaatacatg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3906 cttcatcagtggtaggacgctcaaacctcaaggatttattaacgccgcaccaaatacatg 3965 Query: 386 tcccagaactattgcattcaatcctaaatatagcatgtttgtcactgcagatgaaactgt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3966 tcccagaactattgcattcaatcctaaatatagcatgtttgtcactgcagatgaaactgt 4025 Query: 446 agatttctacgtatataacgaatgaattatactgggatctggatatatgacttcgaagcc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4026 agatttctacgtatataacgaatgaattatactgggatctggatatatgacttcgaagcc 4085 Query: 506 agactctacccagagcacccatctatttaggaatggcactcgacatctcgataacatttc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4086 agactctacccagagcacccatctatttaggaatggcactcgacatctcgataacatttc 4145 Query: 566 catgttaccgatgacacaaagctgccttttaggtctggtcatcgcgacatttaatcttct 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4146 catgttaccgatgacacaaagctgccttttaggtctggtcatcgcgacatttaatcttct 4205 Query: 626 ttcatctttcaagaacccaacctcgaaattctcgttacttcttactaaagataggatgat 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4206 ttcatctttcaagaacccaacctcgaaattctcgttacttcttactaaagataggatgat 4265 Query: 686 gcactccttttctctaccttgaaatccgtctacggtagatatctcaattgcttgatgctt 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4266 gcactccttttctctaccttgaaatccgtctacggtagatatctcaattgcttgatgctt 4325 Query: 746 ttcatggatgagttttttcaacagcgatacttgtgaattatacggggagatcacaccaat 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4326 ttcatggatgagttttttcaacagcgatacttgtgaattatacggggagatcacaccaat 4385 Query: 806 acttttcttccgtaacacccagcctttatcaactgctcaacctggtattatgccaaatat 865 || |||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 4386 ac-tttcttccgtaaca-ccagcctttatcaactgctcaacgtggtataatgccaaatat 4443 Query: 866 gcttcatttttcgttggattttgaaga 892 |||||| ||||||||| |||||||||| Sbjct: 4444 gcttca-ttttcgttgtattttgaaga 4469 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5767 Number of Sequences: 1807 Number of extensions: 5767 Number of successful extensions: 32 Number of sequences better than 1.0e-20: 1 length of query: 917 length of database: 10,358,551 effective HSP length: 16 effective length of query: 901 effective length of database: 10,329,639 effective search space: 9307004739 effective search space used: 9307004739 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)