BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZB04RM1.SCF screened BAC_end (869 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1217 1528 0.0 >3x_Contig1217 Length = 5307 Score = 1528 bits (771), Expect = 0.0 Identities = 808/820 (98%), Gaps = 1/820 (0%) Strand = Plus / Minus Query: 46 ctccggaataacgaagtattatgctgtctggaatagcatacggttcttattgaacacttt 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4301 ctccggaataacgaagtattatgctgtctggaatagcatacggttcttattgaacacttt 4242 Query: 106 tgcattctcagttgaaaacagggtacgtattaaaagccttgacgttgagaagcatgaagt 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4241 tgcattctcagttgaaaacagggtacgtattaaaagccttgacgttgagaagcatgaagt 4182 Query: 166 aattatgagatgggaaacccatcccttggctgcagataatctagggagtatcaagaaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4181 aattatgagatgggaaacccatcccttggctgcagataatctagggagtatcaagaaagc 4122 Query: 226 tgagtcagagacgaaaatttcagggatctttatctttggtttgaatgagaactgtgataa 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4121 tgagtcagagacgaaaatttcagggatctttatctttggtttgaatgagaactgtgataa 4062 Query: 286 gattacgagtcatctaatagatgatgtcgaaataatcgaaaaagataaaaagatagattt 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4061 gattacgagtcatctaatagatgatgtcgaaataatcgaaaaagataaaaagatagattt 4002 Query: 346 tagttcaaaggttcaaaatggtgcaatcgcctacttcaagacatggtcaggaccatgatc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4001 tagttcaaaggttcaaaatggtgcaatcgcctacttcaagacatggtcaggaccatgatc 3942 Query: 406 tctatggttatcgattccacaagtgcactcttgtatatacacgttgccttttctttattt 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3941 tctatggttatcgattccacaagtgcactcttgtatatacacgttgccttttctttattt 3882 Query: 466 ccaacttgagacatatatatttacgtgtatggaagtatgttaatttagatgggtttttta 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3881 ccaacttgagacatatatatttacgtgtatggaagtatgttaatttagatgggtttttta 3822 Query: 526 ttatgattatatcactagggcaattaacgaaaccttactggaaggcaaagctagaaaata 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3821 ttatgattatatcactagggcaattaacgaaaccttactggaaggcaaagctagaaaata 3762 Query: 586 gtgttgaacctggtatgaatattagatgtctactatttaaagttcgttgtttggacacga 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3761 gtgttgaacctggtatgaatattagatgtctactatttaaagttcgttgtttggacacga 3702 Query: 646 agtgaattgaatggttagttgttacacactgttacttgataatacggcaaatgattcact 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3701 agtgaattgaatggttagttgttacacactgttacttgataatacggcaaatgattcact 3642 Query: 706 gtcaattggccaagtagtgtttgcatcccagtcatatgtccacgaatttctgggagtatc 765 |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 3641 gtcaattggccaagtagtgtttgcatcccagtcataggtccacgaatttctggagttatc 3582 Query: 766 tcttggaatccagtnctcanatgaaatactctcagctgcaggttc-aaattttaaaatga 824 |||||| ||||||| |||| ||||||||||||||||||||||||| |||||| ||||||| Sbjct: 3581 tcttgggatccagtcctcaaatgaaatactctcagctgcaggttcaaaatttaaaaatga 3522 Query: 825 gaaagatgtanatttttatgatgctggtgatgaagggtac 864 |||||||||| ||||| ||||||||||||||| ||||||| Sbjct: 3521 gaaagatgtagattttaatgatgctggtgatggagggtac 3482 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6177 Number of Sequences: 1807 Number of extensions: 6177 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 869 length of database: 10,358,551 effective HSP length: 16 effective length of query: 853 effective length of database: 10,329,639 effective search space: 8811182067 effective search space used: 8811182067 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)