BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC31ZB04RM1.SCF screened BAC_end
         (869 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1217                                                        1528   0.0  

>3x_Contig1217 
          Length = 5307

 Score = 1528 bits (771), Expect = 0.0
 Identities = 808/820 (98%), Gaps = 1/820 (0%)
 Strand = Plus / Minus

                                                                        
Query: 46   ctccggaataacgaagtattatgctgtctggaatagcatacggttcttattgaacacttt 105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4301 ctccggaataacgaagtattatgctgtctggaatagcatacggttcttattgaacacttt 4242

                                                                        
Query: 106  tgcattctcagttgaaaacagggtacgtattaaaagccttgacgttgagaagcatgaagt 165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4241 tgcattctcagttgaaaacagggtacgtattaaaagccttgacgttgagaagcatgaagt 4182

                                                                        
Query: 166  aattatgagatgggaaacccatcccttggctgcagataatctagggagtatcaagaaagc 225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4181 aattatgagatgggaaacccatcccttggctgcagataatctagggagtatcaagaaagc 4122

                                                                        
Query: 226  tgagtcagagacgaaaatttcagggatctttatctttggtttgaatgagaactgtgataa 285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4121 tgagtcagagacgaaaatttcagggatctttatctttggtttgaatgagaactgtgataa 4062

                                                                        
Query: 286  gattacgagtcatctaatagatgatgtcgaaataatcgaaaaagataaaaagatagattt 345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4061 gattacgagtcatctaatagatgatgtcgaaataatcgaaaaagataaaaagatagattt 4002

                                                                        
Query: 346  tagttcaaaggttcaaaatggtgcaatcgcctacttcaagacatggtcaggaccatgatc 405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4001 tagttcaaaggttcaaaatggtgcaatcgcctacttcaagacatggtcaggaccatgatc 3942

                                                                        
Query: 406  tctatggttatcgattccacaagtgcactcttgtatatacacgttgccttttctttattt 465
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3941 tctatggttatcgattccacaagtgcactcttgtatatacacgttgccttttctttattt 3882

                                                                        
Query: 466  ccaacttgagacatatatatttacgtgtatggaagtatgttaatttagatgggtttttta 525
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3881 ccaacttgagacatatatatttacgtgtatggaagtatgttaatttagatgggtttttta 3822

                                                                        
Query: 526  ttatgattatatcactagggcaattaacgaaaccttactggaaggcaaagctagaaaata 585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3821 ttatgattatatcactagggcaattaacgaaaccttactggaaggcaaagctagaaaata 3762

                                                                        
Query: 586  gtgttgaacctggtatgaatattagatgtctactatttaaagttcgttgtttggacacga 645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3761 gtgttgaacctggtatgaatattagatgtctactatttaaagttcgttgtttggacacga 3702

                                                                        
Query: 646  agtgaattgaatggttagttgttacacactgttacttgataatacggcaaatgattcact 705
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3701 agtgaattgaatggttagttgttacacactgttacttgataatacggcaaatgattcact 3642

                                                                        
Query: 706  gtcaattggccaagtagtgtttgcatcccagtcatatgtccacgaatttctgggagtatc 765
            |||||||||||||||||||||||||||||||||||| ||||||||||||||||   ||||
Sbjct: 3641 gtcaattggccaagtagtgtttgcatcccagtcataggtccacgaatttctggagttatc 3582

                                                                        
Query: 766  tcttggaatccagtnctcanatgaaatactctcagctgcaggttc-aaattttaaaatga 824
            |||||| ||||||| |||| ||||||||||||||||||||||||| |||||| |||||||
Sbjct: 3581 tcttgggatccagtcctcaaatgaaatactctcagctgcaggttcaaaatttaaaaatga 3522

                                                    
Query: 825  gaaagatgtanatttttatgatgctggtgatgaagggtac 864
            |||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 3521 gaaagatgtagattttaatgatgctggtgatggagggtac 3482


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6177
Number of Sequences: 1807
Number of extensions: 6177
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 869
length of database: 10,358,551
effective HSP length: 16
effective length of query: 853
effective length of database: 10,329,639
effective search space: 8811182067
effective search space used: 8811182067
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)