BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZB05FM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1527 1279 0.0 >3x_Contig1527 Length = 8131 Score = 1279 bits (645), Expect = 0.0 Identities = 697/708 (98%), Gaps = 5/708 (0%) Strand = Plus / Plus Query: 86 atgaaatgagagatatgttaccggcccaggatacgaccagcaatctcaccgaaactggcg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6726 atgaaatgagagatatgttaccggcccaggatacgaccagcaatctcaccgaaactggcg 6785 Query: 146 atgacatacgggaattaagatatagtgataatagaccaatctgggagaagatttggtgcg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6786 atgacatacgggaattaagatatagtgataatagaccaatctgggagaagatttggtgcg 6845 Query: 206 ggccaataaacccagaggatgaacctccaaaattccatctaagatggaagacgttgaagt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6846 ggccaataaacccagaggatgaacctccaaaattccatctaagatggaagacgttgaagt 6905 Query: 266 atctggacggactaccgaagaggctatttaattcaaatctcgggaacaaagctttggtac 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6906 atctggacggactaccgaagaggctatttaattcaaatctcgggaacaaagctttggtac 6965 Query: 326 gatacgggatacttatcatttatgtgtcaatttggttcagcattgtgtcatccatacttt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6966 gatacgggatacttatcatttatgtgtcaatttggttcagcattgtgtcatccatacttt 7025 Query: 386 ttccttatctacttcgcgctccagtattcagtcaaaatggaagtggagaagacatcacta 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7026 ttccttatctacttcgcgctccagtattcagtcaaaatggaagtggagaagacatcacta 7085 Query: 446 tcatgcctttgacgtgtacacaatcattgaaaagctggaaaggagaaaataatgcctgtg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7086 tcatgcctttgacgtgtacacaatcattgaaaagctggaaaggagaaaataatgcctgtg 7145 Query: 506 gaactaatgcagagttttgtacaactactgacaatgactttttcgtaagatgtccagcgt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7146 gaactaatgcagagttttgtacaactactgacaatgactttttcgtaagatgtccagcgt 7205 Query: 566 tatgcgatcgagcatggatttattcggcacagacggtcggtaatcaaagagttaaatata 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7206 tatgcgatcgagcatggatttattcggcacagacggtcggtaatcaaagagttaaatata 7265 Query: 626 gagaattcaacattggaggtggtccaacgnaagataatgccattttatcccacccttatt 685 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct: 7266 gagaattcaacattggaggtggtccaacgaaagataatgccattttatcccaccctta-t 7324 Query: 686 cgtggtgattctgccatatgtttcagtgcgtattatttcaggtttaatatccggtttatc 745 |||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||| Sbjct: 7325 cgtggtgattctgccatatgttccagtgcgtatca-ttcaggtttaatatccggtttatc 7383 Query: 746 ttgggggatgtgtttcgattttcaagcccaggaacctcaagctaaatt 793 ||||||||||| ||||| | ||||||| ||| ||||||||||||||| Sbjct: 7384 -tgggggatgtg-ttcgagtatcaagccaagg-acctcaagctaaatt 7428 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5375 Number of Sequences: 1807 Number of extensions: 5375 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)