BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC31ZB05RM1.SCF screened BAC_end
         (897 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1751                                                        1342   0.0  

>3x_Contig1751 
          Length = 24682

 Score = 1342 bits (677), Expect = 0.0
 Identities = 770/793 (97%), Gaps = 6/793 (0%)
 Strand = Plus / Minus

                                                                         
Query: 46    tcgttatttgggttgatctcaccgatctgtacccctgtagttgctgcaagctctaaatca 105
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18653 tcgttatttgggttgatctcaccgatctgtacccctgtagttgctgcaagctctaaatca 18594

                                                                         
Query: 106   tccttatcaatcgccaggaggatattatatctgtcgatacatgtttgagcaggtctaccc 165
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18593 tccttatcaatcgccaggaggatattatatctgtcgatacatgtttgagcaggtctaccc 18534

                                                                         
Query: 166   atcatttctccgatgcttttccattggtttggaattcttttcgctaaatctagtagttta 225
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18533 atcatttctccgatgcttttccattggtttggaattcttttcgctaaatctagtagttta 18474

                                                                         
Query: 226   tcatcttcctgctggctgaatggtttgaagtttagactgggattcaaaaattcattccaa 285
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18473 tcatcttcctgctggctgaatggtttgaagtttagactgggattcaaaaattcattccaa 18414

                                                                         
Query: 286   cgagattgacattgcctggcattcttcttctgtagaagcgaagctactttactccatgca 345
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18413 cgagattgacattgcctggcattcttcttctgtagaagcgaagctactttactccatgca 18354

                                                                         
Query: 346   tgtgttccatatttttgaacagccgcctttaatatttgatcctcaaggttcgtccaaata 405
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18353 tgtgttccatatttttgaacagccgcctttaatatttgatcctcaaggttcgtccaaata 18294

                                                                         
Query: 406   ccacctttgacataaatcggaacaggagccatcgtacgtggttaccgcctttgattaact 465
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18293 ccacctttgacataaatcggaacaggagccatcgtacgtggttaccgcctttgattaact 18234

                                                                         
Query: 466   tccctttgaaccaacgttacagctttagctgatactattattaattagtttcctatgttt 525
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18233 tccctttgaaccaacgttacagctttagctgatactattattaattagtttcctatgttt 18174

                                                                         
Query: 526   ccaccaagtatatgtcaattttattttcaatccaatcccaaaattggattatctagattt 585
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18173 ccaccaagtatatgtcaattttattttcaatccaatcccaaaattggattatctagattt 18114

                                                                         
Query: 586   acacagtgttataaagaaat-aaacaatgtcagcgaataaagagggaactgtatccgaac 644
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 18113 acacagtgttataaagaaataaaacaatgtcagcgaataaagagggaactgtatccgaac 18054

                                                                         
Query: 645   acatagtttacatatttgctttactcgcaagagcataagtaccttttttcgtattatttt 704
             |||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| 
Sbjct: 18053 acatagtttacata-ttgctttactcgcaagagcataggtacc-tttttcgtattatttc 17996

                                                                         
Query: 705   accaatgctggatacgggtttcttttgtgacttcctccagacagtacttcggtcttt-aa 763
             | ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 17995 agcaatgctggatactggtttcttttgtgacttcctccagtcagtacttcggtctttaaa 17936

                                                                         
Query: 764   ctaccctat-ttttttttgaataccaccaaccctgaaatttttttagaaaacccctgacg 822
             ||| ||||| |||| || |||||| || ||| |||||||| ||| ||||||| | |||| 
Sbjct: 17935 cta-cctatattttattagaatacaacaaactctgaaattctttcagaaaacacatgaca 17877

                          
Query: 823   gattttgagaaag 835
             |||  ||||||||
Sbjct: 17876 gataatgagaaag 17864


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8385
Number of Sequences: 1807
Number of extensions: 8385
Number of successful extensions: 75
Number of sequences better than 1.0e-20: 1
length of query: 897
length of database: 10,358,551
effective HSP length: 16
effective length of query: 881
effective length of database: 10,329,639
effective search space: 9100411959
effective search space used: 9100411959
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)