BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC31ZB07FM1.SCF screened BAC_end
         (868 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1798                                                        1507   0.0  

>3x_Contig1798 
          Length = 38968

 Score = 1507 bits (760), Expect = 0.0
 Identities = 775/781 (99%)
 Strand = Plus / Minus

                                                                        
Query: 85   tcattttctccatccacttctccgaccgtacctgatcttggaaaaccatcgaatccttac 144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8027 tcattttctccatccacttctccgaccgtacctgatcttggaaaaccatcgaatccttac 7968

                                                                        
Query: 145  aagtgtgttgaatatctggattatgacggtagcagaatttaaagaaattgaactgaggca 204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7967 aagtgtgttgaatatctggattatgacggtagcagaatttaaagaaattgaactgaggca 7908

                                                                        
Query: 205  tttcactcggaagctgtatttcctcattgttttgattgaccttggaagctttgtttcgta 264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7907 tttcactcggaagctgtatttcctcattgttttgattgaccttggaagctttgtttcgta 7848

                                                                        
Query: 265  gaatttcccccttcccatcagtatcctgtcgttgatctgacactccattcgaatctacat 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7847 gaatttcccccttcccatcagtatcctgtcgttgatctgacactccattcgaatctacat 7788

                                                                        
Query: 325  cttcgaacttacgctttaaatccggtctgcatgtctgttgaaggttaaactccattttga 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7787 cttcgaacttacgctttaaatccggtctgcatgtctgttgaaggttaaactccattttga 7728

                                                                        
Query: 385  aatacgatcgtaactcgtatggtatatttgaatatattgatgagataaaatgatggggta 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7727 aatacgatcgtaactcgtatggtatatttgaatatattgatgagataaaatgatggggta 7668

                                                                        
Query: 445  tattgactcaaaacaacttccctagcgttctctttccaaaatgtttattctgttcctcaa 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7667 tattgactcaaaacaacttccctagcgttctctttccaaaatgtttattctgttcctcaa 7608

                                                                        
Query: 505  acttttgtaaatataccataaccagtgatcaaagtgatgcagtactgcaaaacccttcgt 564
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 7607 acttttgtaaatataccagaaccagtgatcaaagtgatgcagtactgcaaaacccttcgt 7548

                                                                        
Query: 565  ttatgtctcttatccacaaggatataattcctttccttgattcacaggaaaattctataa 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7547 ttatgtctcttatccacaaggatataattcctttccttgattcacaggaaaattctataa 7488

                                                                        
Query: 625  gaacaccaccaatgatgagcactagtacctttctttaccgaaacttgttgttcttcccta 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7487 gaacaccaccaatgatgagcactagtacctttctttaccgaaacttgttgttcttcccta 7428

                                                                        
Query: 685  tctgagctctctccgctgctgatctttcgtttgttctgaatatttccaaaccgcttaata 744
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 7427 tctgagctctctccgctgctgatctttcgtttgttctgaaaatttccaaaccgcttaata 7368

                                                                        
Query: 745  caacanatatgatgctttatatanatcatacaaactattggtagatcggnaagtgagacg 804
            ||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||
Sbjct: 7367 caacaaatatgatgctttatataaatcaaacaaactattggtagatcgggaagtgagacg 7308

                                                                        
Query: 805  cccctttaaggattaagaagtcttactttggcagtgtttttccttttgaagaagtccttt 864
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7307 cccctttaaggattaagaagtcttactttggcagtgtttttccttttgaagaagtccttt 7248

             
Query: 865  g 865
            |
Sbjct: 7247 g 7247


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6400
Number of Sequences: 1807
Number of extensions: 6400
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)