BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZB08RM1.SCF screened BAC_end (901 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1375 1463 0.0 >3x_Contig1375 Length = 6996 Score = 1463 bits (738), Expect = 0.0 Identities = 813/829 (98%), Gaps = 7/829 (0%) Strand = Plus / Minus Query: 52 cttattatccaatttacaggatgtttttgttattcttttccattctgacgaggtcgctga 111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4696 cttattatccaatttacaggatgtttttgttattcttttccattctgacgaggtcgctga 4637 Query: 112 ttctgttagactatctgtgatatccttgatcgttgaacacattccattaaaggatgtttt 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4636 ttctgttagactatctgtgatatccttgatcgttgaacacattccattaaaggatgtttt 4577 Query: 172 caaaacactgcagaaagtatggacaaatgatgtatcaagttcaaataattcagttgctgt 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4576 caaaacactgcagaaagtatggacaaatgatgtatcaagttcaaataattcagttgctgt 4517 Query: 232 atccttatttttgtctatgttagaatctgctgttgaagctattgataagaagtcggcaac 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4516 atccttatttttgtctatgttagaatctgctgttgaagctattgataagaagtcggcaac 4457 Query: 292 gcaacaatctcctgttttcttcagattattgttgaacttgtttgaatacagatctatttg 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4456 gcaacaatctcctgttttcttcagattattgttgaacttgtttgaatacagatctatttg 4397 Query: 352 taccttcgatgagaattcaatcaaccgtattgaggcttctgtccatcaaattgctaatgt 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4396 taccttcgatgagaattcaatcaaccgtattgaggcttctgtccatcaaattgctaatgt 4337 Query: 412 atatgtccttaagttgaacgataaggttttcagacctctatttgctttggtagtaaattg 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4336 atatgtccttaagttgaacgataaggttttcagacctctatttgctttggtagtaaattg 4277 Query: 472 ggccttcaatggtgaaggagttacaaacacaaacatgtcgaaagaagaaaggctaatggc 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4276 ggccttcaatggtgaaggagttacaaacacaaacatgtcgaaagaagaaaggctaatggc 4217 Query: 532 attctataagttctacaacaagacacaagataacttgaagtcgatcatcacatcttattt 591 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 4216 attctataagttctacaacaagacacaagaaaacttgaagtcgatcatcacatcttattt 4157 Query: 592 cacctacctcttggaaccaaccaacaatctactgaaacaattcatctcgaaggagaccgt 651 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4156 cacctacctcttggaaccaaccaacaatctactgaaacaattcatctcgaaggagaccgt 4097 Query: 652 taatgtgagccttcgtcgtttggttttgattttcttgacatcttctttc-aatatgatag 710 |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 4096 taatgtgagccttcgtcgtttggttttgatttccttgacatcttctttcaaatatgatag 4037 Query: 711 agatgaatattggaagtctacctcaagattcgaactgatnagtgaatctttgatt-acca 769 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4036 agatgaatattggaagtctacctcaagattcgaactgataagtgaatctttgattaacca 3977 Query: 770 attgaccaatgtcgaagatgtcattggt-aatacttggtgaa-gcccttgtttcattagc 827 |||||||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||| Sbjct: 3976 attgaccaatgtcgaagatgtcattggtaaatacttggtgaaggccattggttcattagc 3917 Query: 828 cac-aatacct-tggtggtgatgaacattattagatc-tgagcgaccta 873 ||| |||| || ||||| |||||||||| || ||||| ||||||||||| Sbjct: 3916 cacaaataactctggtgttgatgaacataataagatcatgagcgaccta 3868 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7590 Number of Sequences: 1807 Number of extensions: 7590 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 901 length of database: 10,358,551 effective HSP length: 16 effective length of query: 885 effective length of database: 10,329,639 effective search space: 9141730515 effective search space used: 9141730515 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)