BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZC02FM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig189 1388 0.0 >3x_Contig189 Length = 1476 Score = 1388 bits (700), Expect = 0.0 Identities = 744/756 (98%), Gaps = 2/756 (0%) Strand = Plus / Plus Query: 86 taagagtaagtaaaagaagatcc-agagcatagaaattgatttgaaaagcagcataaaac 144 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 79 taagagtaagtaaaagaagatcccagagcatagaaattgatttgaaaagcagcataaaac 138 Query: 145 agtccctcgcgcctcattgcaaggatcttatttcagatcagtgagcctcctttatcgtaa 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 agtccctcgcgcctcattgcaaggatcttatttcagatcagtgagcctcctttatcgtaa 198 Query: 205 attagatcaccatgttttccagcgttttcaagactggatttcgctcactaaatccattag 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 attagatcaccatgttttccagcgttttcaagactggatttcgctcactaaatccattag 258 Query: 265 aaagtctgcaagtaaccgctaggcgttttacacatgaatatgctccacgtttcaagaacc 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 aaagtctgcaagtaaccgctaggcgttttacacatgaatatgctccacgtttcaagaacc 318 Query: 325 agactaagaagcaaaagggtcgtgtgccagtgcgtaccggtggctctactaagggtaatt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 319 agactaagaagcaaaagggtcgtgtgccagtgcgtaccggtggctctactaagggtaatt 378 Query: 385 cgcttcaatttggtcaatttggtttaagattgaagtctgaaggtgtgagacttactgcgt 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 cgcttcaatttggtcaatttggtttaagattgaagtctgaaggtgtgagacttactgcgt 438 Query: 445 tacagttgaaggaagccgataatgctattatgagatacgttagacctttgaataacggtc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 tacagttgaaggaagccgataatgctattatgagatacgttagacctttgaataacggtc 498 Query: 505 aattatggcgtcgtttgtgtacaaacattgctgtttgtatcaagggtaatgagaccagaa 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 aattatggcgtcgtttgtgtacaaacattgctgtttgtatcaagggtaatgagaccagaa 558 Query: 565 tgggtaaaggtaagggtggatttgaccattggatggtcagagtacccaccggtaaagtga 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 tgggtaaaggtaagggtggatttgaccattggatggtcagagtacccaccggtaaagtga 618 Query: 625 tctttgagatggcaggtgacaatctacacgagaaagtagcacgtgaggcgtttagaaagg 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 tctttgagatggcaggtgacaatctacacgagaaagtagcacgtgaggcgtttagaaagg 678 Query: 685 cagcaaccaagcttcctggcctatacgaattcatatcgaaagattctctggttagagtag 744 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 679 cagcaaccaagcttcctggcctatacgaattcatatcgaaagattctctggtaagagtag 738 Query: 745 gtatcaagagtgttaaagatcccaaagacgatccaaagatcaattacctttgagtactta 804 ||||||||||||| |||||||| || |||||||||||||||||||| |||||| | || Sbjct: 739 gtatcaagagtgtaaaagatccaaaggacgatccaaagatcaatta-ctttgaagaacta 797 Query: 805 aggaagaaacctacaaaggaatattttacaaagttg 840 | |||||||||||||||||||||| ||||||||||| Sbjct: 798 aagaagaaacctacaaaggaatatattacaaagttg 833 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5456 Number of Sequences: 1807 Number of extensions: 5456 Number of successful extensions: 26 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)