BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZD03RM1.SCF screened BAC_end (955 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1801 1467 0.0 >3x_Contig1801 Length = 57606 Score = 1467 bits (740), Expect = 0.0 Identities = 874/906 (96%), Gaps = 10/906 (1%) Strand = Plus / Minus Query: 48 ttatcgaatctggataatgataacggtgacgcggacgatgcagatctatttgaggaagaa 107 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 50434 ttatcgaatctggataatgagaacggtgacgcggacgatgcagatctatttgaggaagaa 50375 Query: 108 cccgaggaacaaaaccctgctaatgaagcatccgaatctgatttgttgaaatccccatct 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50374 cccgaggaacaaaaccctgctaatgaagcatccgaatctgatttgttgaaatccccatct 50315 Query: 168 aaagaagacgatactaccgcagcaggtaatgaggaacaagaacaagaacaagatcaagaa 227 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 50314 aaagaagacgatactaccgcagcaggtaatgaggaacaagaacaagaacaagaacaagaa 50255 Query: 228 caggacgaacaaatggataaagagaatgacgaaatcgcgttgccagaaactaaaaaggaa 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50254 caggacgaacaaatggataaagagaatgacgaaatcgcgttgccagaaactaaaaaggaa 50195 Query: 288 agcgattcgaacggcgaggggaacaatgaccctgttggaaatatagaaactgaacagagc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50194 agcgattcgaacggcgaggggaacaatgaccctgttggaaatatagaaactgaacagagc 50135 Query: 348 gaggtagaacctgcacagaacgaactggaaactgccaatgacaaacaagagccagcacca 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50134 gaggtagaacctgcacagaacgaactggaaactgccaatgacaaacaagagccagcacca 50075 Query: 408 gaaccagaatcatttactgaaaaccccaaattaccagacgtgaaggacttatggcagccc 467 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 50074 gaaccagaatcatttactgaaaaccccaaattaccagacgtgaaggacttagggcagccc 50015 Query: 468 gattctggtatagatgctccagtacatactacaacagagacaacagttgatgaagaaatt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50014 gattctggtatagatgctccagtacatactacaacagagacaacagttgatgaagaaatt 49955 Query: 528 gataaagagcacaatactgaagcagaagcagaacctgaagtagatagtattcttgaacat 587 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49954 gataaagagcacaatactgaagcagaagcagaacctgaagtagatagtattcttgaacaa 49895 Query: 588 gaatcgagatcagcttctcctgaatcaaatataaccgtaaagcaagaatagt-atactgc 646 |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 49894 gaatcgagatcagcttctcctgaatcaaatataaccgtaaagcaagaa-agtaatactgc 49836 Query: 647 tgatccataattatttgtaccgcaatcccatgaaattgt-atcccttcatactcgaagtg 705 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 49835 tgatccaaaattatttgtaccgcaatcccatgaaattgtaatcccttcatactcgaagtg 49776 Query: 706 ggttaatttgaccanagttcatgaaatcgaagtgaaatctttaccgggaattcttcacta 765 | |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 49775 gtttaatttgaccaaagttcatgaaatcgaagtgaaatctttacc-ggaattcttcacta 49717 Query: 766 ttagaattccttcaaagacaccccagatgtacgtcaaatatcgnaacttcatgggaaacc 825 |||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 49716 atagaataccttcaaagacaccccagatgtacgtcaaatatcgtaacttcatggtaaact 49657 Query: 826 cttatagactaaatccaaatgaattctttacaggtccctgcaggctagaagaaacctttg 885 |||||||||||||||||||||||| ||| ||| ||| ||||| ||||||||||||||||| Sbjct: 49656 cttatagactaaatccaaatgaatacttcaca-gtcactgca-gctagaagaaacctttg 49599 Query: 886 tgggaaacccgggcggccctctttaaaactacataaatttctttaccaaatgggggttgg 945 | ||| || ||||| |||||| || | |||||||||| ||||| ||||||||||| ||| Sbjct: 49598 t-ggagacgcgggc-gccctc-ttcagactacataaa-ttcttaaccaaatggggattga 49543 Query: 946 tcaact 951 |||||| Sbjct: 49542 tcaact 49537 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7468 Number of Sequences: 1807 Number of extensions: 7468 Number of successful extensions: 73 Number of sequences better than 1.0e-20: 1 length of query: 955 length of database: 10,358,551 effective HSP length: 16 effective length of query: 939 effective length of database: 10,329,639 effective search space: 9699531021 effective search space used: 9699531021 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)