BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZD04FM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1668 1594 0.0 >3x_Contig1668 Length = 13429 Score = 1594 bits (804), Expect = 0.0 Identities = 823/827 (99%), Gaps = 2/827 (0%) Strand = Plus / Plus Query: 86 atttcatgggtatgttacttagttcgaatgctacgtacgatgcctccttttggatggctt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2344 atttcatgggtatgttacttagttcgaatgctacgtacgatgcctccttttggatggctt 2403 Query: 146 tgggtatttcttttggttattgcaccttctctttttataagtccatatttaaggttaaaa 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2404 tgggtatttcttttggttattgcaccttctctttttataagtccatatttaaggttaaaa 2463 Query: 206 tggatcttaaaaaacaatggatcagaacttactttgttatgcttagccaaaagtcaaaag 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2464 tggatcttaaaaaacaatggatcagaacttactttgttatgcttagccaaaagtcaaaag 2523 Query: 266 tcagtagtggttcatgacaacaccaatctatcaacatgtcattacctgaattaccgccta 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2524 tcagtagtggttcatgacaacaccaatctatcaacatgtcattacctgaattaccgccta 2583 Query: 326 ggccagatcgtccaaagtctaccgaatcactccattgctccgatgttgagctacctcaaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2584 ggccagatcgtccaaagtctaccgaatcactccattgctccgatgttgagctacctcaaa 2643 Query: 386 atgtggatcttttgacctttaacgacattcaacagttacttcagcaacaggatatgccta 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2644 atgtggatcttttgacctttaacgacattcaacagttacttcagcaacaggatatgccta 2703 Query: 446 aagaatacgcaaaacgcttcaatgataacttagttcaggatatttcaaataaatccgtgg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2704 aagaatacgcaaaacgcttcaatgataacttagttcaggatatttcaaataaatccgtgg 2763 Query: 506 cgtggaaagcacaagctgaacagttaatagaagggttgaataaattagctgaaaataagc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2764 cgtggaaagcacaagctgaacagttaatagaagggttgaataaattagctgaaaataagc 2823 Query: 566 gtcatttgaagggagaattagattcctttaagaagcttgaattcgaatacatgaaaaaat 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2824 gtcatttgaagggagaattagattcctttaagaagcttgaattcgaatacatgaaaaaat 2883 Query: 626 ggcaagatcttgatcttctgatcaatagcaaattcagcaacgatgcgctaaagaagcaac 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2884 ggcaagatcttgatcttctgatcaatagcaaattcagcaacgatgcgctaaagaagcaac 2943 Query: 686 tgcgacacaatgtgatcaatctggatgaaaaatcttctcatatggttaacgaagtgcctg 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2944 tgcgacacaatgtgatcaatctggatgaaaaatcttctcatatggttaacgaagtgcctg 3003 Query: 746 ttactgacgaatctcttgacctgttttttggaacaatatgttaatgagcgcacagaatat 805 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3004 ttactgacgaatctcttgacctg-tttttggaacaatatgttaatgagcgcacagaatat 3062 Query: 806 cacctacagcgagaaaaattggcaacatgggaaccacangatactttgaga-taccatga 864 |||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||| Sbjct: 3063 cacctacagcgagaaaaattggcaacatgggaacaacaggatactttgagattaccatga 3122 Query: 865 gtgtagtgcattattgattattgatgttattatgtaaaatacataga 911 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3123 gtgtagtgcattattgattattgatgttattatgtaaaatacataga 3169 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6263 Number of Sequences: 1807 Number of extensions: 6263 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)