BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC31ZD07FM1.SCF screened BAC_end
         (934 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1222                                                        1479   0.0  

>3x_Contig1222 
          Length = 5224

 Score = 1479 bits (746), Expect = 0.0
 Identities = 809/824 (98%), Gaps = 5/824 (0%)
 Strand = Plus / Plus

                                                                        
Query: 88   cgctttataattgttctaaaatgtgaaccaaccttactccatgctaacagactctctaga 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3643 cgctttataattgttctaaaatgtgaaccaaccttactccatgctaacagactctctaga 3702

                                                                        
Query: 148  ctgtctagtccgctagttactacacgatcaataatttcgatcggaagactcattactttt 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3703 ctgtctagtccgctagttactacacgatcaataatttcgatcggaagactcattactttt 3762

                                                                        
Query: 208  gtacccttaaatcttcttctcctccttcttatcattagcaaatctgtcaaaagtgtcaac 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3763 gtacccttaaatcttcttctcctccttcttatcattagcaaatctgtcaaaagtgtcaac 3822

                                                                        
Query: 268  taatgcagcttatcttgcacgttgtaaactaggtccttataattcaactgatttcaagta 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3823 taatgcagcttatcttgcacgttgtaaactaggtccttataattcaactgatttcaagta 3882

                                                                        
Query: 328  cgctggtatatccaagatgcctttagacttcttccagtgtttgggtcagttgagcaatct 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3883 cgctggtatatccaagatgcctttagacttcttccagtgtttgggtcagttgagcaatct 3942

                                                                        
Query: 388  gttccgtaatctgtcgctttattctttaatatgctgactcaacctcaaagaacgttcgga 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3943 gttccgtaatctgtcgctttattctttaatatgctgactcaacctcaaagaacgttcgga 4002

                                                                        
Query: 448  atacattttgacacttaaagtaccgataaaattgtggattttgttgcctataattgtaag 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4003 atacattttgacacttaaagtaccgataaaattgtggattttgttgcctataattgtaag 4062

                                                                        
Query: 508  caatgaaatatgtttgatattccacctactggaccgtaccaacctacagattgcagcagt 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4063 caatgaaatatgtttgatattccacctactggaccgtaccaacctacagattgcagcagt 4122

                                                                        
Query: 568  atctcgtccaataacaacttccctgtctcagtttggcctcttaatccttcttactgacat 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4123 atctcgtccaataacaacttccctgtctcagtttggcctcttaatccttcttactgacat 4182

                                                                        
Query: 628  tatatctcattacccggacataacatgtcaaaatgatactcaaggcatcaacattaagtt 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4183 tatatctcattacccggacataacatgtcaaaatgatactcaaggcatcaacattaagtt 4242

                                                                        
Query: 688  catttaaacagtacatgcaaataattgaagaatgaagggataagggaagatgaagaagag 747
            |||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||
Sbjct: 4243 catttaaacagtacatgcaaataattgaagaatgaa-ggataaaggaagaagaagaagag 4301

                                                                        
Query: 748  attgccggcactgaggacaccttttccttttccatttcaaccagtggnnatctcattggt 807
            |||||||||||||||||||||||||||||| ||||| ||||||||||   |||||||| |
Sbjct: 4302 attgccggcactgaggacaccttttcctttcccattccaaccagtggat-tctcattgtt 4360

                                                                        
Query: 808  tttcaaatatagaaagtaactgtgctcttaagatgacatacaccatcgaaacatgtaggg 867
            |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4361 tttcaaatatag-aagtaactgtgctctcaagatgacatacaccatcgaaacatgtaggg 4419

                                                        
Query: 868  atgagtagaagcggtttgaaggaacccattgtaccgattcaaca 911
            ||||| ||||||||||||| |||| |||||||| ||||||||||
Sbjct: 4420 atgagaagaagcggtttgagggaa-ccattgta-cgattcaaca 4461


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6673
Number of Sequences: 1807
Number of extensions: 6673
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 934
length of database: 10,358,551
effective HSP length: 16
effective length of query: 918
effective length of database: 10,329,639
effective search space: 9482608602
effective search space used: 9482608602
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)