BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZD09FM1.SCF screened BAC_end (973 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1621 737 0.0 >3x_Contig1621 Length = 10398 Score = 737 bits (372), Expect = 0.0 Identities = 397/404 (98%), Gaps = 1/404 (0%) Strand = Plus / Plus Query: 86 tagaaatcgtttcaattggagattttccatcacccttttctccgttagcatagtactttt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9994 tagaaatcgtttcaattggagattttccatcacccttttctccgttagcatagtactttt 10053 Query: 146 ctgcagcaaacactgcatctgtaccaatagaaaccttatcagcaccagatctgaaataca 205 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10054 ttgcagcaaacactgcatctgtaccaatagaaaccttatcagcaccagatctgaaataca 10113 Query: 206 tgccggccacatctaaagccggtacttttgtgccgtcaacatccacgacatctttgatac 265 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 10114 tgccggccacatctaaagccggtacttttgtgccgtcaacatccccgacatctttgatac 10173 Query: 266 cacctccgactgtcagtggtacaaacacagtcttggcagcaagtcttatcacatccaaca 325 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10174 cacctccgactgtcagtggtacaaacacagtcttggcagcaagtcttagcacatccaaca 10233 Query: 326 ttggagtatcctttaatggacagtttctgaaactggtgatatttaag-aaagtaacttca 384 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 10234 ttggagtatcctttaatggacagtttttgaaactggtgatatttaagaaaagtaacttca 10293 Query: 385 tcagcaccttgttcatagtaacgttgtgcgagctctacaggttttcccaagtttctaacg 444 ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10294 tcagccccttgttcatagtaacgttgtgcgagctctacaggttttccccagtttctaacg 10353 Query: 445 ttgcctccttctgttttttcacggacatcgtattggtccccttt 488 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10354 ttgcctccttctgttttttcacggacatcgtattggtccccttt 10397 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6739 Number of Sequences: 1807 Number of extensions: 6739 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 973 length of database: 10,358,551 effective HSP length: 16 effective length of query: 957 effective length of database: 10,329,639 effective search space: 9885464523 effective search space used: 9885464523 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)