BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC31ZD11RM1.SCF screened BAC_end
         (920 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig515                                                         1612   0.0  

>3x_Contig515 
          Length = 1717

 Score = 1612 bits (813), Expect = 0.0
 Identities = 864/876 (98%), Gaps = 4/876 (0%)
 Strand = Plus / Minus

                                                                        
Query: 47   cggtgtttaccctttgagagaactctcgttgactctttccaattttgatataatagacaa 106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1426 cggtgtttaccctttgagagaactctcgttgactctttccaattttgatataatagacaa 1367

                                                                        
Query: 107  ggggaaaactgtccttgatatgttcggtaatcgagcaatctcaaaatcatcttcaactga 166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1366 ggggaaaactgtccttgatatgttcggtaatcgagcaatctcaaaatcatcttcaactga 1307

                                                                        
Query: 167  taacaacgtcgtaaagatagaaggtgaagacatacattcagattcgaaaggtggccctta 226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1306 taacaacgtcgtaaagatagaaggtgaagacatacattcagattcgaaaggtggccctta 1247

                                                                        
Query: 227  tgatgcgtctgtttcagagacactcgagggagaaccaccaagtgcttcttctcctcctac 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1246 tgatgcgtctgtttcagagacactcgagggagaaccaccaagtgcttcttctcctcctac 1187

                                                                        
Query: 287  aatggctgaaaatttaacttgcaaacagtgcggggaaactctacaggacaaaaaactgtt 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1186 aatggctgaaaatttaacttgcaaacagtgcggggaaactctacaggacaaaaaactgtt 1127

                                                                        
Query: 347  ccaagagcacgtcgattatcatctatcagttcaattatcagaacagattaacggagtatc 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1126 ccaagagcacgtcgattatcatctatcagttcaattatcagaacagattaacggagtatc 1067

                                                                        
Query: 407  agagaactcaacaatgctgacgcacgcagaaagaatccttctcttcggaaagaaagctaa 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 agagaactcaacaatgctgacgcacgcagaaagaatccttctcttcggaaagaaagctaa 1007

                                                                        
Query: 467  gaagaatgccgcatcagtgcaaaaacccaaaaaaaaagatggaggaatcatgaagttctt 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 gaagaatgccgcatcagtgcaaaaacccaaaaaaaaagatggaggaatcatgaagttctt 947

                                                                        
Query: 527  caagaagtgataaatctccacccacatatacttgtatatttatagttaatcgtatcatcg 586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946  caagaagtgataaatctccacccacatatacttgtatatttatagttaatcgtatcatcg 887

                                                                        
Query: 587  tcttaccagtggcatttatatgaggagcgtggttagtaacgaggttccagtcgcatatcc 646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886  tcttaccagtggcatttatatgaggagcgtggttagtaacgaggttccagtcgcatatcc 827

                                                                        
Query: 647  gggtaatatcttgcttttcgtctttctttcttttctgaatt-cacattcgatttcgaact 705
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 826  gggtaatatcttgcttttcgtctttctttcttttctgaattccacattcgatttcgaact 767

                                                                        
Query: 706  t-aaatagacaattaagagatccaatgtttgttaaataagtgtgtaagttgtaattttag 764
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766  taaaatagacaattaagagatccaatgtttgttaaataagtgtgtaagttgtaattttag 707

                                                                        
Query: 765  ccagatcttttttaccctcanaa-gtcaacaggaagagggaagcatgcgatacccagcgt 823
            ||||||| |||||| ||||| || ||||||||||||||||||||| ||||||||||||||
Sbjct: 706  ccagatc-tttttaacctcaaaaggtcaacaggaagagggaagcaagcgatacccagcgt 648

                                                                        
Query: 824  taaaagcagctaacgcacacatattctctgaacagcttccaggctggtatacagctactt 883
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 647  taaaagcagctaacgcacacatattctctgaacagcttccaggctgttatacagctactt 588

                                                
Query: 884  tggactacaactcattgtctttttacagaaccacct 919
            |||||||||||||||| ||||||   ||||||||||
Sbjct: 587  tggactacaactcattttcttttacaagaaccacct 552


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7521
Number of Sequences: 1807
Number of extensions: 7521
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)