BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZD11RM1.SCF screened BAC_end (920 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig515 1612 0.0 >3x_Contig515 Length = 1717 Score = 1612 bits (813), Expect = 0.0 Identities = 864/876 (98%), Gaps = 4/876 (0%) Strand = Plus / Minus Query: 47 cggtgtttaccctttgagagaactctcgttgactctttccaattttgatataatagacaa 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1426 cggtgtttaccctttgagagaactctcgttgactctttccaattttgatataatagacaa 1367 Query: 107 ggggaaaactgtccttgatatgttcggtaatcgagcaatctcaaaatcatcttcaactga 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1366 ggggaaaactgtccttgatatgttcggtaatcgagcaatctcaaaatcatcttcaactga 1307 Query: 167 taacaacgtcgtaaagatagaaggtgaagacatacattcagattcgaaaggtggccctta 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1306 taacaacgtcgtaaagatagaaggtgaagacatacattcagattcgaaaggtggccctta 1247 Query: 227 tgatgcgtctgtttcagagacactcgagggagaaccaccaagtgcttcttctcctcctac 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1246 tgatgcgtctgtttcagagacactcgagggagaaccaccaagtgcttcttctcctcctac 1187 Query: 287 aatggctgaaaatttaacttgcaaacagtgcggggaaactctacaggacaaaaaactgtt 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1186 aatggctgaaaatttaacttgcaaacagtgcggggaaactctacaggacaaaaaactgtt 1127 Query: 347 ccaagagcacgtcgattatcatctatcagttcaattatcagaacagattaacggagtatc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1126 ccaagagcacgtcgattatcatctatcagttcaattatcagaacagattaacggagtatc 1067 Query: 407 agagaactcaacaatgctgacgcacgcagaaagaatccttctcttcggaaagaaagctaa 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1066 agagaactcaacaatgctgacgcacgcagaaagaatccttctcttcggaaagaaagctaa 1007 Query: 467 gaagaatgccgcatcagtgcaaaaacccaaaaaaaaagatggaggaatcatgaagttctt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1006 gaagaatgccgcatcagtgcaaaaacccaaaaaaaaagatggaggaatcatgaagttctt 947 Query: 527 caagaagtgataaatctccacccacatatacttgtatatttatagttaatcgtatcatcg 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 946 caagaagtgataaatctccacccacatatacttgtatatttatagttaatcgtatcatcg 887 Query: 587 tcttaccagtggcatttatatgaggagcgtggttagtaacgaggttccagtcgcatatcc 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 tcttaccagtggcatttatatgaggagcgtggttagtaacgaggttccagtcgcatatcc 827 Query: 647 gggtaatatcttgcttttcgtctttctttcttttctgaatt-cacattcgatttcgaact 705 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 826 gggtaatatcttgcttttcgtctttctttcttttctgaattccacattcgatttcgaact 767 Query: 706 t-aaatagacaattaagagatccaatgtttgttaaataagtgtgtaagttgtaattttag 764 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 taaaatagacaattaagagatccaatgtttgttaaataagtgtgtaagttgtaattttag 707 Query: 765 ccagatcttttttaccctcanaa-gtcaacaggaagagggaagcatgcgatacccagcgt 823 ||||||| |||||| ||||| || ||||||||||||||||||||| |||||||||||||| Sbjct: 706 ccagatc-tttttaacctcaaaaggtcaacaggaagagggaagcaagcgatacccagcgt 648 Query: 824 taaaagcagctaacgcacacatattctctgaacagcttccaggctggtatacagctactt 883 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 647 taaaagcagctaacgcacacatattctctgaacagcttccaggctgttatacagctactt 588 Query: 884 tggactacaactcattgtctttttacagaaccacct 919 |||||||||||||||| |||||| |||||||||| Sbjct: 587 tggactacaactcattttcttttacaagaaccacct 552 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7521 Number of Sequences: 1807 Number of extensions: 7521 Number of successful extensions: 79 Number of sequences better than 1.0e-20: 1 length of query: 920 length of database: 10,358,551 effective HSP length: 16 effective length of query: 904 effective length of database: 10,329,639 effective search space: 9337993656 effective search space used: 9337993656 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)