BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZE04FM1.SCF screened BAC_end (908 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1157 1285 0.0 >3x_Contig1157 Length = 4825 Score = 1285 bits (648), Expect = 0.0 Identities = 757/780 (97%), Gaps = 10/780 (1%) Strand = Plus / Minus Query: 87 ttccgaatgtgtttgagccagtttggctgtggaaggcttcaaaggattcataaaagtatg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1945 ttccgaatgtgtttgagccagtttggctgtggaaggcttcaaaggattcataaaagtatg 1886 Query: 147 agaaagcagtcttataatctttgtcttcacagtgtaagataccactcattaaatccaatt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1885 agaaagcagtcttataatctttgtcttcacagtgtaagataccactcattaaatccaatt 1826 Query: 207 ctgccattgtcaatgttggacaataaatcgaatttgcggatgttctagcacttgtcaaag 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1825 ctgccattgtcaatgttggacaataaatcgaatttgcggatgttctagcacttgtcaaag 1766 Query: 267 cagcctttgatttagtcaaatttcttaatttatggtacactttacattccaatagatgaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1765 cagcctttgatttagtcaaatttcttaatttatggtacactttacattccaatagatgaa 1706 Query: 327 cttcgagcaaagacgatttatcgtccaatttcttaaactgcctcaacaaatcattgatca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1705 cttcgagcaaagacgatttatcgtccaatttcttaaactgcctcaacaaatcattgatca 1646 Query: 387 attgcaaggattcgttgtaatgcgtcttttggtagtaaagagttgccaacctaatcgata 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1645 attgcaaggattcgttgtaatgcgtcttttggtagtaaagagttgccaacctaatcgata 1586 Query: 447 gagaatgctttaaaaagattctcttctcctttgtggcaaagtcgatcgaatcttcgcata 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1585 gagaatgctttaaaaagattctcttctcctttgtggcaaagtcgatcgaatcttcgcata 1526 Query: 507 tctcgatttgggtatccaaggaatcgggtatcaattcgaaatcgttaagtaacgtcttta 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1525 tctcgatttgggtatccaaggaatcgggtatcaattcgaaatcgttaagtaacgtcttta 1466 Query: 567 aaactttggcaatctttgatttcgctactttcatcatgtattcacgagagcgtggtacaa 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1465 aaactttggcaatctttgatttcgctactttcatcatgtattcacgagagcgtggtacaa 1406 Query: 627 actcggcgagtttcttcaactgatgtgtggtaccatacaattgacctagctaaag-atac 685 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 1405 actcggcgagtttcttcaactgatgtgtggtaccatacaattgacctagctcaagaatac 1346 Query: 686 attgttccttttc-tgagcatctttattgctaattgattggggttgtgccggatcttgat 744 ||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 1345 attgttccttttcttgagcatctttattgctaattgattggggttgtgcggcatcttgat 1286 Query: 745 gg-tcaatactg-tttgaaacgggctttaaccttcttataa-cttcctt-cctacaagat 800 || ||||||||| | ||| | |||| | |||||| |||| ||||||| |||||||||| Sbjct: 1285 ggttcaatactgctaagaactgcgcttcagccttctcataatcttccttccctacaagat 1226 Query: 801 ttttagcttcttccaacgacttat-taa-tggga-tatttgc-ttctttcctgttccttt 856 || ||||||||||||||||| ||| ||| ||||| ||||||| ||||||||||||||||| Sbjct: 1225 ttctagcttcttccaacgacatatctaagtgggattatttgctttctttcctgttccttt 1166 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6418 Number of Sequences: 1807 Number of extensions: 6418 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 908 length of database: 10,358,551 effective HSP length: 16 effective length of query: 892 effective length of database: 10,329,639 effective search space: 9214037988 effective search space used: 9214037988 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)