BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZE06FM1.SCF screened BAC_end (895 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1709 1495 0.0 >3x_Contig1709 Length = 16948 Score = 1495 bits (754), Expect = 0.0 Identities = 793/800 (99%), Gaps = 5/800 (0%) Strand = Plus / Minus Query: 87 ggccaatactgatgatattgataagaaaaaatcgacattagacattaaatatgaaaagat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2464 ggccaatactgatgatattgataagaaaaaatcgacattagacattaaatatgaaaagat 2405 Query: 147 gttaacagagttaaacaatgagatctcggccacgtccaggcaaataaaaacattacaaaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2404 gttaacagagttaaacaatgagatctcggccacgtccaggcaaataaaaacattacaaaa 2345 Query: 207 tgtgattatagaacaagaggacgaaaataaaaaactcaaacagttaaaaaagcatatgga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2344 tgtgattatagaacaagaggacgaaaataaaaaactcaaacagttaaaaaagcatatgga 2285 Query: 267 taatgaaccaaacggttcaggaacgacccaggttcaatcagcagatggtacaacgatcaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2284 taatgaaccaaacggttcaggaacgacccaggttcaatcagcagatggtacaacgatcaa 2225 Query: 327 ttggactcaagtgatgaaaagaattaatgattctactttatccaagtcagggttattgtc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2224 ttggactcaagtgatgaaaagaattaatgattctactttatccaagtcagggttattgtc 2165 Query: 387 ttcaagcggtgatgatctattgaatacgttaccgtcgcaatctcaactagtgcaaactat 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2164 ttcaagcggtgatgatctattgaatacgttaccgtcgcaatctcaactagtgcaaactat 2105 Query: 447 cagatcggagattgacatggactctaaattggataatcaatggaaagcctctaaacattt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2104 cagatcggagattgacatggactctaaattggataatcaatggaaagcctctaaacattt 2045 Query: 507 gtttaacaaaagaattgaccaattggagaaagtatggaaagatatgcaggcggaaaatac 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2044 gtttaacaaaagaattgaccaattggagaaagtatggaaagatatgcaggcggaaaatac 1985 Query: 567 acaacttaagaatgaacttacattacagacatactcgatgtctcaacaaccttcacaaca 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1984 acaacttaagaatgaacttacattacagacatactcgatgtctcaacaaccttcacaaca 1925 Query: 627 cggtattaatggcgatcttgctggtcagaatcaaccccaagcgcatcaattacgcctgca 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1924 cggtattaatggcgatcttgctggtcagaatcaaccccaagcgcatcaattacgcctgca 1865 Query: 687 tgatccttcctnctatacaaattataatacatctggnatctttgctggcgcagaccgtcg 746 ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1864 tgatccttcctcctatacaaattataatacatctgg-atctttgctggcgcagaccgtcg 1806 Query: 747 cttctgctncatttagctcttgggctgc-acaaggacagcagcagcagcagcatattgac 805 |||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 1805 cttctgctccatttagctctt-ggctgcaacaaggacagcagcagcagcagcatattgac 1747 Query: 806 cataatcagattcctcactcacatgatcacgcccatagtcctccttttgtc-agtcatga 864 |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 1746 cataatcagattcctcactcacatgatcacgcccatagtcctcc-tttgtcaagtcatga 1688 Query: 865 aactttttaccacaatactg 884 |||||||||||||||||||| Sbjct: 1687 aactttttaccacaatactg 1668 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7139 Number of Sequences: 1807 Number of extensions: 7139 Number of successful extensions: 223 Number of sequences better than 1.0e-20: 1 length of query: 895 length of database: 10,358,551 effective HSP length: 16 effective length of query: 879 effective length of database: 10,329,639 effective search space: 9079752681 effective search space used: 9079752681 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)