BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZE08FM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig922 1423 0.0 >3x_Contig922 Length = 4170 Score = 1423 bits (718), Expect = 0.0 Identities = 789/806 (97%), Gaps = 5/806 (0%) Strand = Plus / Minus Query: 88 cttcttcatccttgatttgttcagcataatagtctgggtattttctgaaacaattttgca 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3600 cttcttcatccttgatttgttcagcataatagtctgggtattttctgaaacaattttgca 3541 Query: 148 tagtggagaacttctcaacacagttgataccctttggatcagcttcagagtagacaaaac 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3540 tagtggagaacttctcaacacagttgataccctttggatcagcttcagagtagacaaaac 3481 Query: 208 atgaaaaagcggacttaaactcttcaccgcaaggaccgtatgccataccacctaaacaag 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3480 atgaaaaagcggacttaaactcttcaccgcaaggaccgtatgccataccacctaaacaag 3421 Query: 268 gacaatcccagttgatttcaccagtttctgggttgtatgcagtttgttgttcgttttttt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3420 gacaatcccagttgatttcaccagtttctgggttgtatgcagtttgttgttcgttttttt 3361 Query: 328 tttcaccttgaacacctgcagccgcagcagccgcagtagcggactgttcagcagtgccac 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3360 tttcaccttgaacacctgcagccgcagcagccgcagtagcggactgttcagcagtgccac 3301 Query: 388 cggagatagaccgaatttcagcttgctcttctgcttctgttatggtctcagcttcagcag 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3300 cggagatagaccgaatttcagcttgctcttctgcttctgttatggtctcagcttcagcag 3241 Query: 448 gagatttttcatgcaaaacaacatccgattcaccttctgaaccgtcttttgaggcggttt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3240 gagatttttcatgcaaaacaacatccgattcaccttctgaaccgtcttttgaggcggttt 3181 Query: 508 ttacggcatctgggcttgtttgttgaatctcctttttgtcagcttcatcttctaaaacaa 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3180 ttacggcatctgggcttgtttgttgaatctcctttttgtcagcttcatcttctaaaacaa 3121 Query: 568 cacccttggcagtttttgagtcatcgaagctcaaagagggagctttggtatcctcggaaa 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3120 cacccttggcagtttttgagtcatcgaagctcaaagagggagctttggtatcctcggaaa 3061 Query: 628 tgccagtaacaggttcattggtggcttctc-cactggcagctggttcggtagcttgttca 686 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3060 tgccagtaacaggttcattggtggcttctcgcactggcagctggttcggtagcttgttca 3001 Query: 687 ttgacggattcagcaactggctcaatggcagctggctcatctcctgataaagtggctgct 746 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3000 ttgacggattcagcaactggctcaatggcagctggctcatctcctgataaggtggctgct 2941 Query: 747 taggcctggtgtgtctcctcgct-taagtaatctcgttcttcagagtagtaactgcctca 805 |||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| Sbjct: 2940 aaggcctggtgtgtctcctcgctataagtaatctcgttctcaggagtagtaactcgctca 2881 Query: 806 gcacctttcttctgagcagacacccgagattcatcgccattccttcgtaggttcagaatt 865 ||||||| || ||||||||||||| ||||||||||| || |||||||||||||||||| | Sbjct: 2880 gcaccttcctcctgagcagacaccggagattcatcggca-tccttcgtaggttcagaaat 2822 Query: 866 agatttgtgaattggcccgctgcagg 891 ||| ||||| |||||||||||||||| Sbjct: 2821 aga-ttgtg-attggcccgctgcagg 2798 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6484 Number of Sequences: 1807 Number of extensions: 6484 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)