BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC31ZE08FM1.SCF screened BAC_end
         (928 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig922                                                         1423   0.0  

>3x_Contig922 
          Length = 4170

 Score = 1423 bits (718), Expect = 0.0
 Identities = 789/806 (97%), Gaps = 5/806 (0%)
 Strand = Plus / Minus

                                                                        
Query: 88   cttcttcatccttgatttgttcagcataatagtctgggtattttctgaaacaattttgca 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3600 cttcttcatccttgatttgttcagcataatagtctgggtattttctgaaacaattttgca 3541

                                                                        
Query: 148  tagtggagaacttctcaacacagttgataccctttggatcagcttcagagtagacaaaac 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3540 tagtggagaacttctcaacacagttgataccctttggatcagcttcagagtagacaaaac 3481

                                                                        
Query: 208  atgaaaaagcggacttaaactcttcaccgcaaggaccgtatgccataccacctaaacaag 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3480 atgaaaaagcggacttaaactcttcaccgcaaggaccgtatgccataccacctaaacaag 3421

                                                                        
Query: 268  gacaatcccagttgatttcaccagtttctgggttgtatgcagtttgttgttcgttttttt 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3420 gacaatcccagttgatttcaccagtttctgggttgtatgcagtttgttgttcgttttttt 3361

                                                                        
Query: 328  tttcaccttgaacacctgcagccgcagcagccgcagtagcggactgttcagcagtgccac 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3360 tttcaccttgaacacctgcagccgcagcagccgcagtagcggactgttcagcagtgccac 3301

                                                                        
Query: 388  cggagatagaccgaatttcagcttgctcttctgcttctgttatggtctcagcttcagcag 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3300 cggagatagaccgaatttcagcttgctcttctgcttctgttatggtctcagcttcagcag 3241

                                                                        
Query: 448  gagatttttcatgcaaaacaacatccgattcaccttctgaaccgtcttttgaggcggttt 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3240 gagatttttcatgcaaaacaacatccgattcaccttctgaaccgtcttttgaggcggttt 3181

                                                                        
Query: 508  ttacggcatctgggcttgtttgttgaatctcctttttgtcagcttcatcttctaaaacaa 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3180 ttacggcatctgggcttgtttgttgaatctcctttttgtcagcttcatcttctaaaacaa 3121

                                                                        
Query: 568  cacccttggcagtttttgagtcatcgaagctcaaagagggagctttggtatcctcggaaa 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3120 cacccttggcagtttttgagtcatcgaagctcaaagagggagctttggtatcctcggaaa 3061

                                                                        
Query: 628  tgccagtaacaggttcattggtggcttctc-cactggcagctggttcggtagcttgttca 686
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3060 tgccagtaacaggttcattggtggcttctcgcactggcagctggttcggtagcttgttca 3001

                                                                        
Query: 687  ttgacggattcagcaactggctcaatggcagctggctcatctcctgataaagtggctgct 746
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3000 ttgacggattcagcaactggctcaatggcagctggctcatctcctgataaggtggctgct 2941

                                                                        
Query: 747  taggcctggtgtgtctcctcgct-taagtaatctcgttcttcagagtagtaactgcctca 805
             |||||||||||||||||||||| ||||||||||||||||   |||||||||||  ||||
Sbjct: 2940 aaggcctggtgtgtctcctcgctataagtaatctcgttctcaggagtagtaactcgctca 2881

                                                                        
Query: 806  gcacctttcttctgagcagacacccgagattcatcgccattccttcgtaggttcagaatt 865
            ||||||| || ||||||||||||| ||||||||||| || |||||||||||||||||| |
Sbjct: 2880 gcaccttcctcctgagcagacaccggagattcatcggca-tccttcgtaggttcagaaat 2822

                                      
Query: 866  agatttgtgaattggcccgctgcagg 891
            ||| ||||| ||||||||||||||||
Sbjct: 2821 aga-ttgtg-attggcccgctgcagg 2798


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6484
Number of Sequences: 1807
Number of extensions: 6484
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)