BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZE09FM1.SCF screened BAC_end (886 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig994 1507 0.0 >3x_Contig994 Length = 4780 Score = 1507 bits (760), Expect = 0.0 Identities = 793/802 (98%), Gaps = 2/802 (0%) Strand = Plus / Plus Query: 86 tatacacaatgctatagccagcacttatctggagaagtcattgggggaaatttcgtatac 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2500 tatacacaatgctatagccagcacttatctggagaagtcattgggggaaatttcgtatac 2559 Query: 146 taccagacaggctgtggtacaaacatataataataccgcattagtttcgggcatatgtat 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2560 taccagacaggctgtggtacaaacatataataataccgcattagtttcgggcatatgtat 2619 Query: 206 gtaatccatactttgaaccattgggtacttgataacaagtctacattcgttgcaagtgtg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2620 gtaatccatactttgaaccattgggtacttgataacaagtctacattcgttgcaagtgtg 2679 Query: 266 atggaagtctgagttattttgtgtgaatcttctgttagtttcacaaaacgtcgatctctc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2680 atggaagtctgagttattttgtgtgaatcttctgttagtttcacaaaacgtcgatctctc 2739 Query: 326 ttcgtcatcactatcgtcacatatatcctgaattcgaaggatatttaaaatcttctcaaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2740 ttcgtcatcactatcgtcacatatatcctgaattcgaaggatatttaaaatcttctcaaa 2799 Query: 386 tctgaaagcataaatgccacgccactcggttaatcgataaagaaacattagtccagagcc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2800 tctgaaagcataaatgccacgccactcggttaatcgataaagaaacattagtccagagcc 2859 Query: 446 atttgcaaccacaatgcaatttatttcgcgtaagtgacaaaccattattttgttgcttga 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2860 atttgcaaccacaatgcaatttatttcgcgtaagtgacaaaccattattttgttgcttga 2919 Query: 506 gagatcaacacagttgaaattcaagggaaatatcggcctagtaaatgcattcatgataat 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2920 gagatcaacacagttgaaattcaagggaaatatcggcctagtaaatgcattcatgataat 2979 Query: 566 tggatctgttccaagcaaactggtctcaaaagtcgaagtagcctcaaatatgaaattact 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2980 tggatctgttccaagcaaactggtctcaaaagtcgaagtagcctcaaatatgaaattact 3039 Query: 626 tcctgatgtctttgaaaaaaactttggaccatcgttattaaatcttgattcatcgcanat 685 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 3040 tcctgatgtctttgaaaaaaactttggaccatcgttattaaatcttgattcatcgcaaat 3099 Query: 686 ccgaagatatttaattatcgatttatccacgtattcatcaacagcatctttatcaatgcg 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3100 ccgaagatatttaattatcgatttatccacgtattcatcaacagcatctttatcaatgcg 3159 Query: 746 attcagtatagggatatctagttgtctagcggtgaaacaatc-ttgatattagaaggaga 804 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 3160 attcagtatagggatatctagttgtctagcggtgaaacaatctttaatattagaaggaga 3219 Query: 805 aaattcttcacttttcaattctgaggatttaatttgagtaaatttccaggtctgttggaa 864 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 3220 aaattctccacttttcaattctgaggatttaatttgagtaaatttccaggtcttgtggaa 3279 Query: 865 gtagat-cctctnaataaatca 885 |||||| | ||| ||||||||| Sbjct: 3280 gtagatacgtctcaataaatca 3301 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6529 Number of Sequences: 1807 Number of extensions: 6529 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 886 length of database: 10,358,551 effective HSP length: 16 effective length of query: 870 effective length of database: 10,329,639 effective search space: 8986785930 effective search space used: 8986785930 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)