BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZE10FM1.SCF screened BAC_end (931 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig596 1239 0.0 >3x_Contig596 Length = 2286 Score = 1239 bits (625), Expect = 0.0 Identities = 765/803 (95%), Gaps = 7/803 (0%) Strand = Plus / Plus Query: 93 catatgtggttgccaacagcagaacacttgatactttcaatactattcctattctcctgt 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 970 catatgtggttgccaacagcagaacacttgatactttcaatactattcctattctcctgt 1029 Query: 153 tctaccaattgggaggatttcaggtttataagaactggtgccttcttttagcaaagaaat 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1030 tctaccaattgggaggatttcaggtttataagaactggtgccttcttttagcaaagaaat 1089 Query: 213 gtttggatattcctgatgtgagttctgttgaaagtatagcgtttttaaaggatgatcagg 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1090 gtttggatattcctgatgtgagttctgttgaaagtatagcgtttttaaaggatgatcagg 1149 Query: 273 acgtactaatttcccatggtattgttgctacactctctttcatgaacaaggctctacagt 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1150 acgtactaatttcccatggtattgttgctacactctctttcatgaacaaggctctacagt 1209 Query: 333 tgcagacaatggaaatgattcgttctacaaaagattactatcctaacgatgatatctcct 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1210 tgcagacaatggaaatgattcgttctacaaaagattactatcctaacgatgatatctcct 1269 Query: 393 acaatataacatccggtgttatcgttactataaaaatacttgtgcttggtatggtgaaag 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1270 acaatataacatccggtgttatcgttactataaaaatacttgtgcttggtatggtgaaag 1329 Query: 453 aaattttcgaaattgatgagctcttctctagcgatcgaagacgtttcccatatccagtat 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1330 aaattttcgaaattgatgagctcttctctagcgatcgaagacgtttcccatatccagtat 1389 Query: 513 tcaaacaattgttaaacatgataaaaaacatttactcctctgcagacgaagttgaagatt 572 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1390 tcaaacaattgttaaacatgataaaaaacatttactcctctgcagacgaggttgaagatt 1449 Query: 573 ctgatttttccctttatgaactaaggtgggatttagtt-caccctcac-atgcanaat-a 629 |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||| | Sbjct: 1450 ctgatttttccctttatgaactaaggtgggatttagttccaccctcacaatgcaaaataa 1509 Query: 630 atatgcttaaatcttgccgaatgtcagaagaagtcgcaaggggatacttggaagaaccat 689 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | || Sbjct: 1510 atatgcttaaatcttgcggaatgtcagaagaagtcgcaaggggatacttggaagagcaat 1569 Query: 690 ctgatgatttaccgatgctcgtgaaaccagacgtttttagtgaaaatgagttggaaaagt 749 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1570 ctgatgatttaccgatgctcgtgaaaccagacgtttttagtgaaaatgagtgggaaaagt 1629 Query: 750 tcaaagcttgcagagcccattggagatgganagacagatcctccactttttcctcccccc 809 ||| ||| |||| ||| |||||| | ||||||||| | ||| || ||||| ||| Sbjct: 1630 acaaggctgcaagag-ccagtggagaatggaagacagatctccaactattacctccaccc 1688 Query: 810 ttttagaactccagccccaaaggaaatttttgccgaattccgaacaagttttctaccgaa 869 | | |||||| |||| |||||||| |||| || ||||||| || |||| ||||||||||| Sbjct: 1689 tatgagaactacagcaccaaaggagatttatg-cgaattcagagcaag-tttctaccgaa 1746 Query: 870 atgggttttgaacaaaaagtgct 892 || |||||||| ||||||||||| Sbjct: 1747 at-ggttttgagcaaaaagtgct 1768 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6765 Number of Sequences: 1807 Number of extensions: 6765 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 931 length of database: 10,358,551 effective HSP length: 16 effective length of query: 915 effective length of database: 10,329,639 effective search space: 9451619685 effective search space used: 9451619685 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)