BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC31ZE10FM1.SCF screened BAC_end
         (931 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig596                                                         1239   0.0  

>3x_Contig596 
          Length = 2286

 Score = 1239 bits (625), Expect = 0.0
 Identities = 765/803 (95%), Gaps = 7/803 (0%)
 Strand = Plus / Plus

                                                                        
Query: 93   catatgtggttgccaacagcagaacacttgatactttcaatactattcctattctcctgt 152
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970  catatgtggttgccaacagcagaacacttgatactttcaatactattcctattctcctgt 1029

                                                                        
Query: 153  tctaccaattgggaggatttcaggtttataagaactggtgccttcttttagcaaagaaat 212
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1030 tctaccaattgggaggatttcaggtttataagaactggtgccttcttttagcaaagaaat 1089

                                                                        
Query: 213  gtttggatattcctgatgtgagttctgttgaaagtatagcgtttttaaaggatgatcagg 272
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1090 gtttggatattcctgatgtgagttctgttgaaagtatagcgtttttaaaggatgatcagg 1149

                                                                        
Query: 273  acgtactaatttcccatggtattgttgctacactctctttcatgaacaaggctctacagt 332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1150 acgtactaatttcccatggtattgttgctacactctctttcatgaacaaggctctacagt 1209

                                                                        
Query: 333  tgcagacaatggaaatgattcgttctacaaaagattactatcctaacgatgatatctcct 392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1210 tgcagacaatggaaatgattcgttctacaaaagattactatcctaacgatgatatctcct 1269

                                                                        
Query: 393  acaatataacatccggtgttatcgttactataaaaatacttgtgcttggtatggtgaaag 452
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1270 acaatataacatccggtgttatcgttactataaaaatacttgtgcttggtatggtgaaag 1329

                                                                        
Query: 453  aaattttcgaaattgatgagctcttctctagcgatcgaagacgtttcccatatccagtat 512
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1330 aaattttcgaaattgatgagctcttctctagcgatcgaagacgtttcccatatccagtat 1389

                                                                        
Query: 513  tcaaacaattgttaaacatgataaaaaacatttactcctctgcagacgaagttgaagatt 572
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1390 tcaaacaattgttaaacatgataaaaaacatttactcctctgcagacgaggttgaagatt 1449

                                                                        
Query: 573  ctgatttttccctttatgaactaaggtgggatttagtt-caccctcac-atgcanaat-a 629
            |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||| |
Sbjct: 1450 ctgatttttccctttatgaactaaggtgggatttagttccaccctcacaatgcaaaataa 1509

                                                                        
Query: 630  atatgcttaaatcttgccgaatgtcagaagaagtcgcaaggggatacttggaagaaccat 689
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 1510 atatgcttaaatcttgcggaatgtcagaagaagtcgcaaggggatacttggaagagcaat 1569

                                                                        
Query: 690  ctgatgatttaccgatgctcgtgaaaccagacgtttttagtgaaaatgagttggaaaagt 749
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1570 ctgatgatttaccgatgctcgtgaaaccagacgtttttagtgaaaatgagtgggaaaagt 1629

                                                                        
Query: 750  tcaaagcttgcagagcccattggagatgganagacagatcctccactttttcctcccccc 809
             ||| |||   |||| ||| ||||||  |  |||||||||  | ||| || ||||| |||
Sbjct: 1630 acaaggctgcaagag-ccagtggagaatggaagacagatctccaactattacctccaccc 1688

                                                                        
Query: 810  ttttagaactccagccccaaaggaaatttttgccgaattccgaacaagttttctaccgaa 869
            | | |||||| |||| |||||||| |||| || ||||||| || |||| |||||||||||
Sbjct: 1689 tatgagaactacagcaccaaaggagatttatg-cgaattcagagcaag-tttctaccgaa 1746

                                   
Query: 870  atgggttttgaacaaaaagtgct 892
            || |||||||| |||||||||||
Sbjct: 1747 at-ggttttgagcaaaaagtgct 1768


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6765
Number of Sequences: 1807
Number of extensions: 6765
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)