BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZF01FM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig952 1388 0.0 >3x_Contig952 Length = 3817 Score = 1388 bits (700), Expect = 0.0 Identities = 787/807 (97%), Gaps = 7/807 (0%) Strand = Plus / Minus Query: 88 tataactccagtggatgaaaatcctcatcttcacaacaaagctttaaaaacttgatactg 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1325 tataactccagtggatgaaaatcctcatcttcacaacaaagctttaaaaacttgatactg 1266 Query: 148 ctattctgaatttgattcgactgccaatgcggtaatctggccgacgaagtgtattcttga 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1265 ctattctgaatttgattcgactgccaatgcggtaatctggccgacgaagtgtattcttga 1206 Query: 208 ctcgttttttccctcgttaaagtttggatgtactggattttgtactgctgaaaagattgt 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1205 ctcgttttttccctcgttaaagtttggatgtactggattttgtactgctgaaaagattgt 1146 Query: 268 acctttactgttttaaactgtatgtccattgttgtcatctggcgcttcggaagatcataa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1145 acctttactgttttaaactgtatgtccattgttgtcatctggcgcttcggaagatcataa 1086 Query: 328 gataaaaactcttcataaagttccgattctcgttgtaccaacctgctatgcattactgga 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gataaaaactcttcataaagttccgattctcgttgtaccaacctgctatgcattactgga 1026 Query: 388 aattcacaagagtgtctaagtgttctccctagcggttgtaaaaagtcctcatttaaccga 447 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1025 aattcacaagagtgtctaagtgttct-cctagcggttgtaaaaagtcctcatttaaccga 967 Query: 448 tatttagcatgtacattttgatcgaatttattcaacctaacagaaaggtccaactttgtt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 966 tatttagcatgtacattttgatcgaatttattcaacctaacagaaaggtccaactttgtt 907 Query: 508 aaggcagcactgaacaaatctttcacattatctctaactataatcttttctttgtatagt 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 906 aaggcagcactgaacaaatctttcacattatctctaactataatcttttctttgtatagt 847 Query: 568 gatcttgtatctacattctgattgctgttatatggtgccttgcatttccattccggatta 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 846 gatcttgtatctacattctgattgctgttatatggtgccttgcatttccattccggatta 787 Query: 628 ttccagnggccggatgtatcctttgactaaaattgcagtggtatcgaattcaatgatata 687 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 786 ttccag-ggccggatgtatcctttgactaaaattgcagtggtatcgaattcaatgatata 728 Query: 688 tttcaccaaagatgatccatttgattcctttctgccgactttgtgaaactttaaatcaat 747 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 727 tttcaccaaagatgatccatttgattccttcttgccgactttgtgaaactttaaatcaat 668 Query: 748 atcactccgagtagccaatttcaagtacctctttggtcggcctattcaattgnatgcttt 807 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 667 atcactccgagtagccaatttcaagtacctcttt-gtcggcctattcaattgtatgcttt 609 Query: 808 ctctttatcctcttctttaaattaaccggcaaactcttctttggatattgtttctcaact 867 ||| ||| ||||||| |||| |||||| | |||||||||| | ||| ||||||||||| Sbjct: 608 ctc-ttagtctcttctctaaa-taaccgccgaactcttcttcgaata-tgtttctcaac- 553 Query: 868 tttaacgctggaatgttccacatagct 894 |||||||||| | ||| |||||||||| Sbjct: 552 tttaacgctgaagtgtcccacatagct 526 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6818 Number of Sequences: 1807 Number of extensions: 6818 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)