BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZF09FM1.SCF screened BAC_end (954 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1491 1304 0.0 >3x_Contig1491 Length = 9571 Score = 1304 bits (658), Expect = 0.0 Identities = 712/728 (97%), Gaps = 2/728 (0%) Strand = Plus / Minus Query: 89 gtgacgcagtgttgaaagaatgcgaaacggtacgatatctgcttcgccacgcagacttca 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9186 gtgacgcagtgttgaaagaatgcgaaacggtacgatatctgcttcgccacgcagacttca 9127 Query: 149 agaatagaactatgagaaccatgagatgtatggattgtggtgaaattagctgtggatcga 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9126 agaatagaactatgagaaccatgagatgtatggattgtggtgaaattagctgtggatcga 9067 Query: 209 ctttcatttgcttgcaatgcggattttgcgggtgctggaataacaaccatttcttggatc 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9066 ctttcatttgcttgcaatgcggattttgcgggtgctggaataacaaccatttcttggatc 9007 Query: 269 attctcaaaaattgggacacatctttggggttaattcatcaaatggtctagtgttctgtt 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9006 attctcaaaaattgggacacatctttggggttaattcatcaaatggtctagtgttctgtt 8947 Query: 329 tcagatgtggtgatttcatggctgatctggtcgctgaaattccggctagccaatgggata 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8946 tcagatgtggtgatttcatggctgatctggtcgctgaaattccggctagccaatgggata 8887 Query: 389 ctgtaatggaaaagaccgagctaccagctagcttacacagagatggattacaaggtttgg 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8886 ctgtaatggaaaagaccgagctaccagctagcttacacagagatggattacaaggtttgg 8827 Query: 449 tgaacatgggatccacctgtttcatgagtagtatcattcaaaccatcatacataatccat 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8826 tgaacatgggatccacctgtttcatgagtagtatcattcaaaccatcatacataatccat 8767 Query: 509 actttgtcgaggacctgttatctcataagcattgcaacaattgtgacattaaatcatgaa 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 8766 actttgtcgaggacctgttatctcataagcattgcaacaattgtgacattaaatcaggaa 8707 Query: 569 ccaagtgcgtctcttgtgcattggatgaaattgcttgtgacttttacgggaatggacctg 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8706 ccaagtgcgtctcttgtgcattggatgaaattgcttgtgacttttacgggaatggacctg 8647 Query: 629 ngacagggaagtcttcctncgttagcataagctttgtaaaccctttatctgcatcatggc 688 ||||||||||||||||| |||||||| | |||||||||||| ||||||||||||||||| Sbjct: 8646 ggacagggaagtcttcctccgttagcaaaggctttgtaaaccttttatctgcatcatggc 8587 Query: 689 atatcaatcatcatcttgttggctcgtcac-acaggatgcacatgattactggcagttct 747 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 8586 atatcaatcatcatcttgttggctcgtcacaacaggatgcacatgagtactggcagttct 8527 Query: 748 ta-tgaaccaactgcttacggatcatgcacgatttttccgatcggcaaaagcccttgatt 806 || |||||||||||| |||||||||||||||| | ||| ||||| |||| |||| ||||| Sbjct: 8526 tattgaaccaactgcatacggatcatgcacgagtattcggatcgtcaaaggcccctgatt 8467 Query: 807 gtcaatgt 814 |||||||| Sbjct: 8466 gtcaatgt 8459 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5926 Number of Sequences: 1807 Number of extensions: 5926 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 954 length of database: 10,358,551 effective HSP length: 16 effective length of query: 938 effective length of database: 10,329,639 effective search space: 9689201382 effective search space used: 9689201382 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)