BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZF11RM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig772 1427 0.0 >3x_Contig772 Length = 2243 Score = 1427 bits (720), Expect = 0.0 Identities = 829/852 (97%), Gaps = 10/852 (1%) Strand = Plus / Plus Query: 48 cttttttgatatgacctatataacaaaagcgattattaacatactcaataacagtttttt 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 891 cttttttgatatgacctatataacaaaagcgattattaacatactcaataacagtttttt 950 Query: 108 atcgttcagtgtcgtatcacttttgttaactaagacataattttcattgttgtgttttct 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 951 atcgttcagtgtcgtatcacttttgttaactaagacataattttcattgttgtgttttct 1010 Query: 168 tttgttatagctcagtactatatcacagatcagtataccgtttaaactctgaacattata 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1011 tttgttatagctcagtactatatcacagatcagtataccgtttaaactctgaacattata 1070 Query: 228 ttgtgttccttcgttcatcagtaaaaaaaaaggtatgtgtgactactatgtccgattaca 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1071 ttgtgttccttcgttcatcagtaaaaaaaaaggtatgtgtgactactatgtccgattaca 1130 Query: 288 ataggttcgggtttccctcagaggcgatggatatatatatattccctaaactctaacact 347 |||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||| Sbjct: 1131 ataggttcgggtttccctcagaggcgatggatatatatctctcccctaaactctaacact 1190 Query: 348 attcaagattttagacttttacctataaaaaaagtctttggttcatattactaacaaatt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1191 attcaagattttagacttttacctataaaaaaagtctttggttcatattactaacaaatt 1250 Query: 408 cttttgattattatacacagagctaatcaactgttcgttattagtgttttttccggttaa 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1251 cttttgattattatacacagagctaatcaactgttcgttattagtgttttttccggttaa 1310 Query: 468 aaagaacatcttctttgccattgtctaaaaccatgtttagacttgtccaacaacagaccc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1311 aaagaacatcttctttgccattgtctaaaaccatgtttagacttgtccaacaacagaccc 1370 Query: 528 taaagagtagggtcccaaatcagttcgtttctgcgtccagaaattctttatattcccagt 587 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1371 taaagagtagggtcccaaatcagttcgtttctgcgtccagaaattctttaaattcccagt 1430 Query: 588 tccgtttcaacagcgctgtcgcactagatgcgt-atcctcaacaggatccaacaactgca 646 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 1431 tccgtttcaacagcgctgtcgcactaga-gcgtaatcctcaacaggatccaacaactgca 1489 Query: 647 gcaccagccaagtcgtcttcggataagagaaactctaagaagaagtatgaaaataatgaa 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1490 gcaccagccaagtcgtcttcggataagagaaactctaagaagaagtatgaaaataatgaa 1549 Query: 707 atcattgaacgtaacgttaaaaaggtccgccaccctag-aggaacataaaattcgataat 765 |||||||||||||||||||||||||||||| ||| || || |||||||||||||||||| Sbjct: 1550 atcattgaacgtaacgttaaaaaggtccgcaacctaagaagaaacataaaattcgataat 1609 Query: 766 ttc-aaaactctcctatttct-cagctttctctaaactt-atgccttgaatgactgtttg 822 ||| |||||||||||| |||| ||||||||||||||||| |||||||| ||||||||||| Sbjct: 1610 ttcaaaaactctcctaattctccagctttctctaaacttaatgccttggatgactgtttg 1669 Query: 823 gccagaggtttgg-agcatcttcct-ttgtgcccccgaaggt-aattcctaaatcaatc- 878 ||||||||||||| ||||||||||| | |||||||||| ||| |||||||| ||||||| Sbjct: 1670 gccagaggtttggaagcatcttcctctcgtgcccccgatggtaaattcctagatcaatct 1729 Query: 879 tcattgttttgg 890 |||||||||||| Sbjct: 1730 tcattgttttgg 1741 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,010 Number of Sequences: 1807 Number of extensions: 10010 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)