BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZF12FM1.SCF screened BAC_end (959 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1642 1483 0.0 >3x_Contig1642 Length = 16641 Score = 1483 bits (748), Expect = 0.0 Identities = 843/867 (97%), Gaps = 6/867 (0%) Strand = Plus / Plus Query: 92 attgaatgacgatgaacaagaggccaaattcgttctaccgaatgtcagcaagcatgacac 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12175 attgaatgacgatgaacaagaggccaaattcgttctaccgaatgtcagcaagcatgacac 12234 Query: 152 cgagtttaccgatcttcacagcaagatgaaacattttgccagcatttccctcggtgaaat 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12235 cgagtttaccgatcttcacagcaagatgaaacattttgccagcatttccctcggtgaaat 12294 Query: 212 acgccctgcgtccgtctctttatcgaaggaggtcgcagctcctatatcaaataacatcga 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12295 acgccctgcgtccgtctctttatcgaaggaggtcgcagctcctatatcaaataacatcga 12354 Query: 272 gaaacctacaactacaaaccaacttttatccaagaagattaacagcttattgaatgttcc 331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12355 gaaacctacaactacaaaccaacttttatccaagaagattaacagcttattgaatgttcc 12414 Query: 332 caattatgcgagttacacatctgattcagaaacaaaacgagctcttcaaatccttgatgc 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12415 caattatgcgagttacacatctgattcagaaacaaaacgagctcttcaaatccttgatgc 12474 Query: 392 aaatcactctgatttgggacttaacttcaaccaactggttgcctctgatttcgttggaac 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12475 aaatcactctgatttgggacttaacttcaaccaactggttgcctctgatttcgttggaac 12534 Query: 452 tttaaacagaaaatcacttcgctcaaagcttgagaattcaatgctcaactcccattcgga 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12535 tttaaacagaaaatcacttcgctcaaagcttgagaattcaatgctcaactcccattcgga 12594 Query: 512 tattttgagtaactttcagtctattgcaagaagaatcaaaagactttctggacccttgga 571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12595 tattttgagtaactttcagtctattgcaagaagaatcaaaagactttctggacccttgga 12654 Query: 572 aagaattaacaatgctatgcagaattttaaagatacaacggaatccatagattttgaatt 631 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12655 aagaattaacaatgctatgcagaattttaaagatacaacggaatccatagattttgaatt 12714 Query: 632 cgaacatgtcaaagatagacttgatcaattgaaggcaagacgtcaggtaataattaaatt 691 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12715 cgaacatgtcaaagatagacttgatcaattgaaggcaagacgtcaggtaataattaaatt 12774 Query: 692 aagggattccttgactttaacgcanttagaaactggatcatttacagaatgggaacatta 751 |||||||||||||||||||||||| |||| |||||||||||||||||||||| | |||| Sbjct: 12775 aagggattccttgactttaacgcaattag-aactggatcatttacagaatggaacaatta 12833 Query: 752 atgacctctttctttcagattctgaataaaaatcactttatcaaagaaaaaagcacatat 811 |||||||| |||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 12834 atgacctc-ttctttcagattctgaataaaatcaactttatcaaagaaaaagcaacatat 12892 Query: 812 ctactcttcaatgagaaagacacatctgcttggcgtggcactattaaaaacgatggatta 871 ||||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || | Sbjct: 12893 ctactctccaatgagaagaccacatctgc-tggcgtggcactattaaaaacgatgaataa 12951 Query: 872 tattttaaacggtatcgaacaaacggatatattaattatctcataaacttcattgaagaa 931 || ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 12952 taattt-aacggtatcgaacaaacggatata-taattatctcataaacttcattgaagaa 13009 Query: 932 tatgatacctttatcaagccagtacgg 958 ||||||| |||||||||| |||||||| Sbjct: 13010 tatgata-ctttatcaaggcagtacgg 13035 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7826 Number of Sequences: 1807 Number of extensions: 7826 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 959 length of database: 10,358,551 effective HSP length: 16 effective length of query: 943 effective length of database: 10,329,639 effective search space: 9740849577 effective search space used: 9740849577 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)