BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZG03FM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1383 1612 0.0 >3x_Contig1383 Length = 6139 Score = 1612 bits (813), Expect = 0.0 Identities = 850/857 (99%), Gaps = 4/857 (0%) Strand = Plus / Minus Query: 87 tcttttcaaaatgtgaccacgagacaaattaggagataacttggagacgtaatggtataa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2183 tcttttcaaaatgtgaccacgagacaaattaggagataacttggagacgtaatggtataa 2124 Query: 147 ttcatcacatttttctttaacgacttccactgcatcactggtttctggtaattcaaccag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2123 ttcatcacatttttctttaacgacttccactgcatcactggtttctggtaattcaaccag 2064 Query: 207 agtatcaccttcaccgcacacatacacttcatcctttcttgcatacatttctggcgagaa 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2063 agtatcaccttcaccgcacacatacacttcatcctttcttgcatacatttctggcgagaa 2004 Query: 267 atacttgttggaagatatcttcaattcggtaaatatagcatatggcgaaacagttccggt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2003 atacttgttggaagatatcttcaattcggtaaatatagcatatggcgaaacagttccggt 1944 Query: 327 ggatggtttgattgtgatggaatgtgctcttaaaccagagattggacaatccggcaatag 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1943 ggatggtttgattgtgatggaatgtgctcttaaaccagagattggacaatccggcaatag 1884 Query: 387 tctagaagtccaaggtcccatacatagaacaacctggtcaacgtccaaaaggtcaactgg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1883 tctagaagtccaaggtcccatacatagaacaacctggtcaacgtccaaaaggtcaactgg 1824 Query: 447 ttcttgtaaacgttgttcttctggatcatcaactgttggaatgtacgatactcccgctgc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1823 ttcttgtaaacgttgttcttctggatcatcaactgttggaatgtacgatactcccgctgc 1764 Query: 507 ggcacactgatcgttgaaatgcaactgtgacactttgcccaggattaaatccactgcccc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1763 ggcacactgatcgttgaaatgcaactgtgacactttgcccaggattaaatccactgcccc 1704 Query: 567 agtctccattgccttcaacagtagatagtgagtgaatttgaaaggatgtacttgagcagt 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1703 agtctccattgccttcaacagtagatagtgagtgaatttgaaaggatgtacttgagcagt 1644 Query: 627 ggagtcagttccaccaagagatgaccaatctctcaccaaccgttttttgatccagttcaa 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1643 ggagtcagttccaccaagagatgaccaatctctcaccaaccgttttttgatccagttcaa 1584 Query: 687 atcactaggtagacgtaatgggtctttagataatgcaatcgaggattttgtatccaactc 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1583 atcactaggtagacgtaatgggtctttagataatgcaatcgaggattttgtatccaactc 1524 Query: 747 cgatgcaggtgcctcgtcctcttcatcatcttctccgtaactatattcgtaatcttcgtc 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1523 cgatgcaggtgcctcgtcctcttcatcatcttctccgtaactatattcgtaatcttcgtc 1464 Query: 807 gtcttcagtggtgcccactctgggaacaggttcgttgttcaccactgcacnatgcttttt 866 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 1463 gtcttcagtggtgcccactctggaaacaggttcgttgttcaccactgcac-atgcttttt 1405 Query: 867 gggatttc-ttttctgcgatggctttgctccttga-gtagtcttttcatcattactagca 924 ||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||||||| Sbjct: 1404 tggatttctttttctgcgatggctttgct-cttgaggtagtctttccatcattactagca 1346 Query: 925 taactttcgtcgtcatc 941 ||||||||||||||||| Sbjct: 1345 taactttcgtcgtcatc 1329 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6268 Number of Sequences: 1807 Number of extensions: 6268 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)