BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC31ZG04RM1.SCF screened BAC_end
         (900 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1730                                                        1600   0.0  

>3x_Contig1730 
          Length = 17223

 Score = 1600 bits (807), Expect = 0.0
 Identities = 826/830 (99%), Gaps = 2/830 (0%)
 Strand = Plus / Minus

                                                                         
Query: 47    cttaagatggctgatacaactactagattctgcatctacggtaatgtgtgacccgtcagt 106
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13907 cttaagatggctgatacaactactagattctgcatctacggtaatgtgtgacccgtcagt 13848

                                                                         
Query: 107   atgaatagtgacagacccatcttcaatcgtgatcagggccaatgactggacagaaccaaa 166
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13847 atgaatagtgacagacccatcttcaatcgtgatcagggccaatgactggacagaaccaaa 13788

                                                                         
Query: 167   ttgtaacatcttcaacgcgtctagattttcctcaaattcacaattaagatcgatgattat 226
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13787 ttgtaacatcttcaacgcgtctagattttcctcaaattcacaattaagatcgatgattat 13728

                                                                         
Query: 227   ggcgaacttggaatgcgtaggcacagcagcagttcctaaatgttttaggtatgacgatga 286
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13727 ggcgaacttggaatgcgtaggcacagcagcagttcctaaatgttttaggtatgacgatga 13668

                                                                         
Query: 287   taatggaatattccctagttcattataagcattacaaaaagaacaaaaccacccagctcg 346
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13667 taatggaatattccctagttcattataagcattacaaaaagaacaaaaccacccagctcg 13608

                                                                         
Query: 347   tgaatctcttgaacataaaaaattcgcaaaccctccacagattttacaattggtataatt 406
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13607 tgaatctcttgaacataaaaaattcgcaaaccctccacagattttacaattggtataatt 13548

                                                                         
Query: 407   ctcactgcttgctaggcttgaattcccgtcaattgtcaagtccggctcacaaatggcact 466
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13547 ctcactgcttgctaggcttgaattcccgtcaattgtcaagtccggctcacaaatggcact 13488

                                                                         
Query: 467   tatcgatccacggttatcatctccacaatcgagaactctagctaagcaatctgtccggga 526
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13487 tatcgatccacggttatcatctccacaatcgagaactctagctaagcaatctgtccggga 13428

                                                                         
Query: 527   cgtaggaacggctccataattcaattcaaacatcaagttctagatggtggaatatgcgga 586
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13427 cgtaggaacggctccataattcaattcaaacatcaagttctagatggtggaatatgcgga 13368

                                                                         
Query: 587   cacttgacggatgaaggtgataactctactgtgcgtgtctgctgataggaaaacctttct 646
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13367 cacttgacggatgaaggtgataactctactgtgcgtgtctgctgataggaaaacctttct 13308

                                                                         
Query: 647   ctggagatgagatccaagataagatagagcaggtagcggagaattcaatatcatcacaag 706
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13307 ctggagatgagatccaagataagatagagcaggtagcggagaattcaatatcatcacaag 13248

                                                                         
Query: 707   atccgggtaatgtatatattaggttcattctctttaattttcagtgtttctacgaagttg 766
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13247 atccgggtaatgtatatattaggttcattctctttaattttcagtgtttctacgaagttg 13188

                                                                         
Query: 767   tttatggcatctngaaaagctgaaaaattttgaaaaagagaaagctgatagttagtttag 826
             ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13187 tttatggcatctgaaaaagctgaaaaattttgaaaaagagaaagctgatagttagtttag 13128

                                                               
Query: 827   cttgattac-gaagagatcacc-catttgtgcacacattgtatttaaata 874
             ||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 13127 cttgattacagaagagatcaccacatttgtgcacacattgtatttaaata 13078


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6286
Number of Sequences: 1807
Number of extensions: 6286
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)