BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZG05RM1.SCF screened BAC_end (905 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig341 886 0.0 >3x_Contig341 Length = 2017 Score = 886 bits (447), Expect = 0.0 Identities = 447/447 (100%) Strand = Plus / Plus Query: 48 cgaaatttttttattattttaacagagattatagagaacccctgttaaatgaactgattg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1473 cgaaatttttttattattttaacagagattatagagaacccctgttaaatgaactgattg 1532 Query: 108 ttataattcaccaacgatagatcagtataccttttgttgatgaattatattaatatgaat 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1533 ttataattcaccaacgatagatcagtataccttttgttgatgaattatattaatatgaat 1592 Query: 168 tgttactaaagaattcgaaatgtcgaatttgaagtaatccgaacgaaccgttgttttttt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1593 tgttactaaagaattcgaaatgtcgaatttgaagtaatccgaacgaaccgttgttttttt 1652 Query: 228 ttttaaaaaagagaataatattgtagagagagaattaaccgattaatattatgactaaag 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1653 ttttaaaaaagagaataatattgtagagagagaattaaccgattaatattatgactaaag 1712 Query: 288 atctggcgagaaactgatgggacttgaaaaaccccatctcttactttacccaagagttag 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1713 atctggcgagaaactgatgggacttgaaaaaccccatctcttactttacccaagagttag 1772 Query: 348 ttataatcttagaagttacaaatttacccgttttagaattttcccctccagctaacaata 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1773 ttataatcttagaagttacaaatttacccgttttagaattttcccctccagctaacaata 1832 Query: 408 atgcaccgtcatcgaataatttaaattatagtagcgttttcccgttttaaaagcaaagaa 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1833 atgcaccgtcatcgaataatttaaattatagtagcgttttcccgttttaaaagcaaagaa 1892 Query: 468 ttaaagaattgagtaagaaaatgaaaa 494 ||||||||||||||||||||||||||| Sbjct: 1893 ttaaagaattgagtaagaaaatgaaaa 1919 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,283 Number of Sequences: 1807 Number of extensions: 13283 Number of successful extensions: 112 Number of sequences better than 1.0e-20: 1 length of query: 905 length of database: 10,358,551 effective HSP length: 16 effective length of query: 889 effective length of database: 10,329,639 effective search space: 9183049071 effective search space used: 9183049071 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)