BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC31ZG07RM1.SCF screened BAC_end
         (914 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1742                                                        1626   0.0  

>3x_Contig1742 
          Length = 17167

 Score = 1626 bits (820), Expect = 0.0
 Identities = 864/871 (99%), Gaps = 7/871 (0%)
 Strand = Plus / Plus

                                                                         
Query: 47    gcttcgacaacctccttccaaatctgtaccgtctagtgctactccgactagtagtgcatc 106
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14336 gcttcgacaacctccttccaaatctgtaccgtctagtgctactccgactagtagtgcatc 14395

                                                                         
Query: 107   ggcgagttctgcacggactttgaaaaatcgaccagtacctccaccgacagcatcatcagt 166
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14396 ggcgagttctgcacggactttgaaaaatcgaccagtacctccaccgacagcatcatcagt 14455

                                                                         
Query: 167   gacaccgctatccagtactaactctggaagtgcgatgggatcactttcgaacaaattgca 226
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14456 gacaccgctatccagtactaactctggaagtgcgatgggatcactttcgaacaaattgca 14515

                                                                         
Query: 227   cgggctgaagatcaatacggaccatctgccaacgtctggatcacagcagtcaacccaaag 286
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14516 cgggctgaagatcaatacggaccatctgccaacgtctggatcacagcagtcaacccaaag 14575

                                                                         
Query: 287   tgcagattcgatgacttccaatctaatatccatgtacgatagcgaaccaacaacaagcag 346
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14576 tgcagattcgatgacttccaatctaatatccatgtacgatagcgaaccaacaacaagcag 14635

                                                                         
Query: 347   cagcacaagcctggtaaaccatgggaaagaaagtgaaattatagagcacgatagagatga 406
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14636 cagcacaagcctggtaaaccatgggaaagaaagtgaaattatagagcacgatagagatga 14695

                                                                         
Query: 407   tagcacagatgaacttgagtcagatatatggcaaacttacaagatccatgaacaaattga 466
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14696 tagcacagatgaacttgagtcagatatatggcaaacttacaagatccatgaacaaattga 14755

                                                                         
Query: 467   tacgttgggaatattgggcgaaggaactggaggatcggtcacgaaatgtaagttaaggaa 526
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14756 tacgttgggaatattgggcgaaggaactggaggatcggtcacgaaatgtaagttaaggaa 14815

                                                                         
Query: 527   cggttcaaaaatatttgcattgaagaccattgccacgatagagaatgatggctcagagaa 586
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14816 cggttcaaaaatatttgcattgaagaccattgccacgatagagaatgatggctcagagaa 14875

                                                                         
Query: 587   acaaatattcagagaattgcaattcaacaagagttgtaagtctgatttcatagtgaggta 646
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14876 acaaatattcagagaattgcaattcaacaagagttgtaagtctgatttcatagtgaggta 14935

                                                                         
Query: 647   ttacgggatgtttgcatgcgaagaaacctcgacaatttttattgcgatggaatatatggg 706
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14936 ttacgggatgtttgcatgcgaagaaacctcgacaatttttattgcgatggaatatatggg 14995

                                                                         
Query: 707   cggaagatcgctagattcggtgtacaagcaccttctctct-aggggggacgaattggtga 765
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 14996 cggaagatcgctagattcggtgtacaagcaccttctctctaaggggggacgaattggtga 15055

                                                                         
Query: 766   gaaggttctggggaagatagctgagagcgtactttaga-gactattttatctacacgaaa 824
             |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 15056 gaaggttctggggaagatagctgagagcgtac-ttagaggactattttatctacacgaaa 15114

                                                                         
Query: 825   gaaagatcattcatagagatattaagccacagaacatattgnnttc-acg-aataggaca 882
             |||||||||||||||||||||||||||||||||||||||||  ||| ||| |||||||||
Sbjct: 15115 gaaagatcattcatagagatattaagccacagaacatattg--ttcaacgaaataggaca 15172

                                            
Query: 883   aataaagctctgcgattttggagtcagtgga 913
             |||||||||||||||||||||||||||||||
Sbjct: 15173 aataaagctctgcgattttggagtcagtgga 15203


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5474
Number of Sequences: 1807
Number of extensions: 5474
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)