BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZG07RM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1742 1626 0.0 >3x_Contig1742 Length = 17167 Score = 1626 bits (820), Expect = 0.0 Identities = 864/871 (99%), Gaps = 7/871 (0%) Strand = Plus / Plus Query: 47 gcttcgacaacctccttccaaatctgtaccgtctagtgctactccgactagtagtgcatc 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14336 gcttcgacaacctccttccaaatctgtaccgtctagtgctactccgactagtagtgcatc 14395 Query: 107 ggcgagttctgcacggactttgaaaaatcgaccagtacctccaccgacagcatcatcagt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14396 ggcgagttctgcacggactttgaaaaatcgaccagtacctccaccgacagcatcatcagt 14455 Query: 167 gacaccgctatccagtactaactctggaagtgcgatgggatcactttcgaacaaattgca 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14456 gacaccgctatccagtactaactctggaagtgcgatgggatcactttcgaacaaattgca 14515 Query: 227 cgggctgaagatcaatacggaccatctgccaacgtctggatcacagcagtcaacccaaag 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14516 cgggctgaagatcaatacggaccatctgccaacgtctggatcacagcagtcaacccaaag 14575 Query: 287 tgcagattcgatgacttccaatctaatatccatgtacgatagcgaaccaacaacaagcag 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14576 tgcagattcgatgacttccaatctaatatccatgtacgatagcgaaccaacaacaagcag 14635 Query: 347 cagcacaagcctggtaaaccatgggaaagaaagtgaaattatagagcacgatagagatga 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14636 cagcacaagcctggtaaaccatgggaaagaaagtgaaattatagagcacgatagagatga 14695 Query: 407 tagcacagatgaacttgagtcagatatatggcaaacttacaagatccatgaacaaattga 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14696 tagcacagatgaacttgagtcagatatatggcaaacttacaagatccatgaacaaattga 14755 Query: 467 tacgttgggaatattgggcgaaggaactggaggatcggtcacgaaatgtaagttaaggaa 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14756 tacgttgggaatattgggcgaaggaactggaggatcggtcacgaaatgtaagttaaggaa 14815 Query: 527 cggttcaaaaatatttgcattgaagaccattgccacgatagagaatgatggctcagagaa 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14816 cggttcaaaaatatttgcattgaagaccattgccacgatagagaatgatggctcagagaa 14875 Query: 587 acaaatattcagagaattgcaattcaacaagagttgtaagtctgatttcatagtgaggta 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14876 acaaatattcagagaattgcaattcaacaagagttgtaagtctgatttcatagtgaggta 14935 Query: 647 ttacgggatgtttgcatgcgaagaaacctcgacaatttttattgcgatggaatatatggg 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14936 ttacgggatgtttgcatgcgaagaaacctcgacaatttttattgcgatggaatatatggg 14995 Query: 707 cggaagatcgctagattcggtgtacaagcaccttctctct-aggggggacgaattggtga 765 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 14996 cggaagatcgctagattcggtgtacaagcaccttctctctaaggggggacgaattggtga 15055 Query: 766 gaaggttctggggaagatagctgagagcgtactttaga-gactattttatctacacgaaa 824 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 15056 gaaggttctggggaagatagctgagagcgtac-ttagaggactattttatctacacgaaa 15114 Query: 825 gaaagatcattcatagagatattaagccacagaacatattgnnttc-acg-aataggaca 882 ||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||| Sbjct: 15115 gaaagatcattcatagagatattaagccacagaacatattg--ttcaacgaaataggaca 15172 Query: 883 aataaagctctgcgattttggagtcagtgga 913 ||||||||||||||||||||||||||||||| Sbjct: 15173 aataaagctctgcgattttggagtcagtgga 15203 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5474 Number of Sequences: 1807 Number of extensions: 5474 Number of successful extensions: 35 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)