BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC31ZG09RM1.SCF screened BAC_end
         (927 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1780                                                        1628   0.0  

>3x_Contig1780 
          Length = 27883

 Score = 1628 bits (821), Expect = 0.0
 Identities = 876/888 (98%), Gaps = 5/888 (0%)
 Strand = Plus / Minus

                                                                         
Query: 41    aaattttaaatctttattgggta-gaca-gggctttccgccctataatattctgaaatag 98
             ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 25106 aaattttaaatctttattgggtaagacaagggctttccgccctataatattctgaaatag 25047

                                                                         
Query: 99    gtctgaggagatatctcatccctataccgaaaaagaaaacgttcactcagtctggcttat 158
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 25046 gtctgaggagatatctcatccctataccgaaaaagaaaacgttcactcagtctggcttag 24987

                                                                         
Query: 159   agtgataacctttatttttttttcggcttcaggtgtgtcttaagatattcgtcctatcga 218
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24986 agtgataacctttatttttttttcggcttcaggtgtgtcttaagatattcgtcctatcga 24927

                                                                         
Query: 219   gccttgggttagggttgtgtaaaatttgtatatgctcttaaaatccggatctaggatcta 278
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24926 gccttgggttagggttgtgtaaaatttgtatatgctcttaaaatccggatctaggatcta 24867

                                                                         
Query: 279   taattatctgctgttacaccccctcctatagtaaaagcaaccgatggcatctgaccgaaa 338
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24866 taattatctgctgttacaccccctcctatagtaaaagcaaccgatggcatctgaccgaaa 24807

                                                                         
Query: 339   gaatgtgttttttttcttttcactgtgtgcttcctccataattgctatttgcttgtggcc 398
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24806 gaatgtgttttttttcttttcactgtgtgcttcctccataattgctatttgcttgtggcc 24747

                                                                         
Query: 399   cttgcttgggcaattggcaaaccacgcgtataccctattctaatcttcttcattttctga 458
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24746 cttgcttgggcaattggcaaaccacgcgtataccctattctaatcttcttcattttctga 24687

                                                                         
Query: 459   tccgctggtgaaggctcagttccttttttttttttctcgatcactctcttgggaactggt 518
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24686 tccgctggtgaaggctcagttccttttttttttttctcgatcactctcttgggaactggt 24627

                                                                         
Query: 519   gtgcattttctttttagtggtggtattttaatactacgactgcttcttgcattggtatat 578
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24626 gtgcattttctttttagtggtggtattttaatactacgactgcttcttgcattggtatat 24567

                                                                         
Query: 579   acttttttattatcgggcctatgtgcttgtatgtcatggtgctgccctgttacatatttt 638
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24566 acttttttattatcgggcctatgtgcttgtatgtcatggtgctgccctgttacatatttt 24507

                                                                         
Query: 639   cttcttcttgttcttcttcttcatcttccactgccgtttttactcactcccatacagtgc 698
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24506 cttcttcttgttcttcttcttcatcttccactgccgtttttactcactcccatacagtgc 24447

                                                                         
Query: 699   gcagtaatagggagacttacggacagatagagaagatagacggtcagcagccagccagcc 758
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24446 gcagtaatagggagacttacggacagatagagaagatagacggtcagcagccagccagcc 24387

                                                                         
Query: 759   cataatagcccacacatacatttttttcctctctctattcctctttcgatttggttgata 818
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24386 aataatagcccacacatacatttttttcctctctctattcctctttcgatttggttgata 24327

                                                                         
Query: 819   cattttgttaaaatatattcatttat-tattggatcaaa-aagtttggccttccac-tca 875
             |||||||||||||||||||||||||| |||||||||||| ||  |||||||||||| |||
Sbjct: 24326 cattttgttaaaatatattcatttatatattggatcaaagaaagttggccttccacttca 24267

                                                             
Query: 876   ctctactttgttggtagaaacttcactactggttctcatattanatac 923
             ||||||||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 24266 ctctactttgttgttagaaacttcactactgtttctcatattagatac 24219


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,847
Number of Sequences: 1807
Number of extensions: 16847
Number of successful extensions: 392
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)