BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZG10FM1.SCF screened BAC_end (907 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1793 1267 0.0 >3x_Contig1793 Length = 40499 Score = 1267 bits (639), Expect = 0.0 Identities = 700/718 (97%), Gaps = 2/718 (0%) Strand = Plus / Plus Query: 86 tttgaagtgacggtttggtggaggaacaaaacgacaaaactctatttaagccatcctgta 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12534 tttgaagtgacggtttggtggaggaacaaaacgacaaaactctatttaagccatcctgta 12593 Query: 146 attttgttgtcgtcgttaactcttgcaaatgtttaacatcataattgatatctagctgtc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12594 attttgttgtcgtcgttaactcttgcaaatgtttaacatcataattgatatctagctgtc 12653 Query: 206 tttccaacaacttagaattccatccacccaaaatgattgttaaactttcacctgaaacaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12654 tttccaacaacttagaattccatccacccaaaatgattgttaaactttcacctgaaacaa 12713 Query: 266 ataggtaatcaatatgtttggaagaatgaattgtctcataaactcctaaataatcatcga 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12714 ataggtaatcaatatgtttggaagaatgaattgtctcataaactcctaaataatcatcga 12773 Query: 326 attcagtttcattcgagttcatatagagatagccccaagtcattatagctagctcatcat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12774 attcagtttcattcgagttcatatagagatagccccaagtcattatagctagctcatcat 12833 Query: 386 tgaatagcttgtcttttatggcatcctttattgaaatagttatggacttcctgttaacag 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12834 tgaatagcttgtcttttatggcatcctttattgaaatagttatggacttcctgttaacag 12893 Query: 446 catcaagcgaatccaaagttctatactttaaaagttcacaatatgctttcaaagacaact 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12894 catcaagcgaatccaaagttctatactttaaaagttcacaatatgctttcaaagacaact 12953 Query: 506 ctctacaactaccagataaatattgctntgttatcttctgtaagattcttgaaacaacag 565 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 12954 ctctacaactaccagataaatattgctttgttatcttctgtaagattcttgaaacaacag 13013 Query: 566 ttccaaattcaacagaatgtagtaactgcaatctggggattaaagatgccaaaaggtaca 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13014 ttccaaattcaacagaatgtagtaactgcaatctggggattaaagatgccaaaaggtaca 13073 Query: 626 ctaaaaccggtataattgcggatgggattattcgatttctgatcaaagtcagttgccagt 685 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 13074 ctaaaaccggtataattgcggat-ggattattcgattcctgatcaaagtcagttgccagt 13132 Query: 686 atttgggacacagattgtgaactttaaccaatttttgcttcaataat-ccgaatggattt 744 |||||||||||||| ||||||||| | |||||| ||||| ||||||| ||||||| |||| Sbjct: 13133 atttgggacacagaatgtgaacttaacccaattcttgctccaataatcccgaatgaattt 13192 Query: 745 acgagagagttcgttttgatgtcagccggactttggttataattgattccttttaaag 802 |||||||||| ||| | |||||||| ||||||||| ||| |||||||| |||||||| Sbjct: 13193 acgagagagtccgtatagatgtcaggcggactttgtttagtattgattcgttttaaag 13250 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6415 Number of Sequences: 1807 Number of extensions: 6415 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 907 length of database: 10,358,551 effective HSP length: 16 effective length of query: 891 effective length of database: 10,329,639 effective search space: 9203708349 effective search space used: 9203708349 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)