BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZH01RM1.SCF screened BAC_end (905 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1486 1411 0.0 >3x_Contig1486 Length = 12131 Score = 1411 bits (712), Expect = 0.0 Identities = 725/728 (99%), Gaps = 1/728 (0%) Strand = Plus / Plus Query: 38 agctttacaatttttggagcaatttcaaaagagcatagaagcatggcaaatctgcttcga 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2962 agctttacaatttttggagcaatttcaaaagagcatagaagcatggcaaatctgcttcga 3021 Query: 98 agtattaagcaagcatgaagcagacaacttacagttgcaaatgtttgcttgtcaaactct 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3022 agtattaagcaagcatgaagcagacaacttacagttgcaaatgtttgcttgtcaaactct 3081 Query: 158 agtgaacaaagtcacctatgatctaaaccaggtcaataccgaattagagagtttcaaggg 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3082 agtgaacaaagtcacctatgatctaaaccaggtcaataccgaattagagagtttcaaggg 3141 Query: 218 aaagctctttgagttcatcgctatgtatgaagagaagatcatagtaacacagttgaacgt 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3142 aaagctctttgagttcatcgctatgtatgaagagaagatcatagtaacacagttgaacgt 3201 Query: 278 ggcactagcccgatttaccattcagtatcttgattggaggaatccgctagttgaaattat 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3202 ggcactagcccgatttaccattcagtatcttgattggaggaatccgctagttgaaattat 3261 Query: 338 taatactctaaatggtcttccgggaaagttactactgtttttgaagattctcccagagga 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3262 taatactctaaatggtcttccgggaaagttactactgtttttgaagattctcccagagga 3321 Query: 398 aacattggatatcaaatccactcctctatcccaagatgaatttgagtgtagaacacacga 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3322 aacattggatatcaaatccactcctctatcccaagatgaatttgagtgtagaacacacga 3381 Query: 458 acttatagataacattggagaagacgtattgaaatttttgatttcatgtttggatagagt 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3382 acttatagataacattggagaagacgtattgaaatttttgatttcatgtttggatagagt 3441 Query: 518 cggaactgaaggcatatctgcttctaaaatcatttcgtgctttggatcgtggtgttatga 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3442 cggaactgaaggcatatctgcttctaaaatcatttcgtgctttggatcgtggtgttatga 3501 Query: 578 atttccaatagaacaggtattacaagtgactccattgataaacaccgtgttccaagtctt 637 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3502 atttccaatagaacaggtattacaagtgactccattgataaacaccgtgttccaagtctt 3561 Query: 638 gcatacttcatatgatactgattctgattcttttgaagctgcagtagaatgcttatgtgt 697 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3562 gcatacttcatatgatactgattctgattcttttgaagctgcagtagaatgcttatgtgt 3621 Query: 698 gttattaagagaaacgagagacgcagcccacgatacaatcatacatgcgcttttaccagc 757 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||| Sbjct: 3622 gttattaagagaaacgagagacgcagccaacgatacaatcatacatgcgc-tttacgagc 3680 Query: 758 aactttta 765 |||||||| Sbjct: 3681 aactttta 3688 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7555 Number of Sequences: 1807 Number of extensions: 7555 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 905 length of database: 10,358,551 effective HSP length: 16 effective length of query: 889 effective length of database: 10,329,639 effective search space: 9183049071 effective search space used: 9183049071 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)