BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZH05RM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1759 1618 0.0 >3x_Contig1759 Length = 25622 Score = 1618 bits (816), Expect = 0.0 Identities = 858/868 (98%), Gaps = 3/868 (0%) Strand = Plus / Plus Query: 48 tgattagaaga-cactgtttcctacgagcggaaatgctgttaaatggtttaaaagatctc 106 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7958 tgattagaagaacactgtttcctacgagcggaaatgctgttaaatggtttaaaagatctc 8017 Query: 107 aagttttactcaatgaattcaaatattacaatgttgacgtactgtgtttgcaagaaattg 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8018 aagttttactcaatgaattcaaatattacaatgttgacgtactgtgtttgcaagaaattg 8077 Query: 167 acacggttcaatacaagtctttctggaaaatggagttcacaaaactaggttacatgtgtc 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8078 acacggttcaatacaagtctttctggaaaatggagttcacaaaactaggttacatgtgtc 8137 Query: 227 aattccattttaatcctaccaaaaaccacggagtattaattgcttggaaagaagatctat 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8138 aattccattttaatcctaccaaaaaccacggagtattaattgcttggaaagaagatctat 8197 Query: 287 ttgatatgacagataagatgttaattgactacgacaaagaaacaacaggtgccattgaac 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8198 ttgatatgacagataagatgttaattgactacgacaaagaaacaacaggtgccattgaac 8257 Query: 347 caagaacaactaccaaaaatgttggcatgttgctttctttgaagtttaaaaagaaagtgc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8258 caagaacaactaccaaaaatgttggcatgttgctttctttgaagtttaaaaagaaagtgc 8317 Query: 407 tagaaaaatatccagacaccaaagtcagtggtataattattggtaccacacatttgtttt 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8318 tagaaaaatatccagacaccaaagtcagtggtataattattggtaccacacatttgtttt 8377 Query: 467 ggcatccatttggcacatatgaacggacaagacaatgctatattgtactaaaaaaagtaa 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8378 ggcatccatttggcacatatgaacggacaagacaatgctatattgtactaaaaaaagtaa 8437 Query: 527 aagaattccagaatcgaatcaacgttcttcaaaacgaaaaagacggtgataattcacatt 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8438 aagaattccagaatcgaatcaacgttcttcaaaacgaaaaagacggtgataattcacatt 8497 Query: 587 ggccagcatttttctgtggcgatttcaattctcagccgtttgatgccccatatttgtcca 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8498 ggccagcatttttctgtggcgatttcaattctcagccgtttgatgccccatatttgtcca 8557 Query: 647 tcacatcaaaaccagtggaatataccggaagggctaaaacagttatagagtgcagcactt 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8558 tcacatcaaaaccagtggaatataccggaagggctaaaacagttatagagtgcagcactt 8617 Query: 707 catttaccttctcttaactaagagatggggatgaaggagatagagaagaaagcggcaaca 766 |||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 8618 catttaccttctctaaactaagagatggggatgaaggagaaggagaagaaggcggcaaca 8677 Query: 767 ttgaaaaatttggtaaaggtcaacctgagacccccgtgccagaatcttttttcggcaacg 826 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 8678 ttgaaaaatttggtaaaggtcaacctgagacccccgtgccagaatctttttccggcaacg 8737 Query: 827 aagagc-atagcagttatgtgaggacatgaaaacccttcat-atgacattgacatgcgcg 884 |||||| | |||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 8738 aagagcaaaagcagttatgtgagaacatgaaaacccttcataatgacattgacatgcgcg 8797 Query: 885 ctatatccttgtattcaattgcttactc 912 |||||||||||||||||||||||||||| Sbjct: 8798 ctatatccttgtattcaattgcttactc 8825 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7561 Number of Sequences: 1807 Number of extensions: 7561 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)