BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZH07FM1.SCF screened BAC_end (989 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1720 1134 0.0 >3x_Contig1720 Length = 19870 Score = 1134 bits (572), Expect = 0.0 Identities = 611/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 87 cttacatttggactctgcatatccgatattagaattcgaatacgtacacaacttattctc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9486 cttacatttggactctgcatatccgatattagaattcgaatacgtacacaacttattctc 9427 Query: 147 ctttaaacatcggctacacggtctttcaccatcacatttggtttttgatttcctacaagc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9426 ctttaaacatcggctacacggtctttcaccatcacatttggtttttgatttcctacaagc 9367 Query: 207 atcacatgcttttgatacccttctctttatggttggtaattcggcagagctgcgagaacc 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9366 atcacatgcttttgatacccttctctttatggttggtaattcggcagagctgcgagaacc 9307 Query: 267 attgaccattataaagtgatgcgatgcaaatgaatatgtgttgtatacacggaaaggtga 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9306 attgaccattataaagtgatgcgatgcaaatgaatatgtgttgtatacacggaaaggtga 9247 Query: 327 agaaaaacaaaagctgatccagagaaaaaaaatatttaggatatgatatgaaagactgat 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9246 agaaaaacaaaagctgatccagagaaaaaaaatatttaggatatgatatgaaagactgat 9187 Query: 387 gattccaaacaagtcctgagtatttccgcgaattagtagtttcaaaaaagataacaaccg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9186 gattccaaacaagtcctgagtatttccgcgaattagtagtttcaaaaaagataacaaccg 9127 Query: 447 cttgaatttggttcacttttcttaatcgttgtccttcttctacttcttcctctgctttat 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9126 cttgaatttggttcacttttcttaatcgttgtccttcttctacttcttcctctgctttat 9067 Query: 507 ctgataagttcgtagggccccaatttaactccagtcttcgatgaagaagacagggatgtt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9066 ctgataagttcgtagggccccaatttaactccagtcttcgatgaagaagacagggatgtt 9007 Query: 567 atatttgactaaatatctcctctttatttccgagttcctaaacaagaagactcaattata 626 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9006 atatttgactaaatatctcctctttatttccgagttcctaaacagaaagactcaattata 8947 Query: 627 taccggattattcgatccaagtccatttgataatcaatggatttcgccttcaaagagcat 686 | ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 8946 -aacggattagtcgatccaagtccatttgataatcaatgga-ttcgccttcaaagagca- 8890 Query: 687 ttattaaaatcaaataaacc 706 || |||||||||||||||| Sbjct: 8889 ataataaaatcaaataaacc 8870 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8145 Number of Sequences: 1807 Number of extensions: 8145 Number of successful extensions: 71 Number of sequences better than 1.0e-20: 1 length of query: 989 length of database: 10,358,551 effective HSP length: 16 effective length of query: 973 effective length of database: 10,329,639 effective search space: 10050738747 effective search space used: 10050738747 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)