BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZH08RM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1789 1516 0.0 >3x_Contig1789 Length = 30977 Score = 1516 bits (765), Expect = 0.0 Identities = 804/813 (98%), Gaps = 3/813 (0%) Strand = Plus / Plus Query: 49 cttgtataaggagccaatctaaggacagaggtggtttacgatatgttgaatgctgccaga 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28695 cttgtataaggagccaatctaaggacagaggtggtttacgatatgttgaatgctgccaga 28754 Query: 109 atgaactcatctcttttatttaaagctcatctccataatgtaacaacaagagccacaaga 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28755 atgaactcatctcttttatttaaagctcatctccataatgtaacaacaagagccacaaga 28814 Query: 169 agactactttcacagagctgtaaactggggcagaagcatgtcagcagcaccgcatatgct 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 28815 agactactttcacagagctgtaaactggggcagaagcatgtcagcagcaccgcagatgct 28874 Query: 229 attgaagaacataataccatttctgaggtgatagaagagatcaaacagaaaaagaacccg 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28875 attgaagaacataataccatttctgaggtgatagaagagatcaaacagaaaaagaacccg 28934 Query: 289 gataaagaggcgatgaacaggttattgaatccagtgtttttcaataaacagatcgtcttc 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28935 gataaagaggcgatgaacaggttattgaatccagtgtttttcaataaacagatcgtcttc 28994 Query: 349 tctgataaatcaccatcatggacagggataatggagacggataaagattctgatagccag 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28995 tctgataaatcaccatcatggacagggataatggagacggataaagattctgatagccag 29054 Query: 409 acaccgctaccccattccagtttcaggcttagtgatcatgatataagagatttaccaata 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29055 acaccgctaccccattccagtttcaggcttagtgatcatgatataagagatttaccaata 29114 Query: 469 tcggcgaccagttatcaaaatgtgcgattatccggcatagagaaagccattcaactagtg 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29115 tcggcgaccagttatcaaaatgtgcgattatccggcatagagaaagccattcaactagtg 29174 Query: 529 gcagaaaaagagaagttgagagtagcattggaacacgcactagccccacatttgaatcat 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29175 gcagaaaaagagaagttgagagtagcattggaacacgcactagccccacatttgaatcat 29234 Query: 589 ttaaagaagactgtgaccacagataaagagttgttggacacttgcatgcattacttggac 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29235 ttaaagaagactgtgaccacagataaagagttgttggacacttgcatgcattacttggac 29294 Query: 649 caatacttgcaaagggatcccaagatggatggtcaaacgaataggttcatcgaagtgatc 708 ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||| Sbjct: 29295 caatacttgcaaagggatcccaagatggaggttcaaacgaaaaggttcatcgaagtgatc 29354 Query: 709 cacaagagatcttgcgaggaaccatccaatttaccacaaccttattcaataacgttacct 768 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29355 cacaagagatcttgcgaggaaccatccaatttaccacaaccttattcaataacgttacct 29414 Query: 769 gccatcatacggtacatatttgatagtggagagttcaaactacctggagattgaaactat 828 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 29415 gccatcatacggtacatatttgatagtggagagttcaaactacctggagatagaaactat 29474 Query: 829 -ttattttaaagac-atttac-ataaatgcaaa 858 |||| |||||||| |||||| ||||||||||| Sbjct: 29475 attatattaaagacaatttacaataaatgcaaa 29507 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6573 Number of Sequences: 1807 Number of extensions: 6573 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)