BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC31ZH11FM1.SCF screened BAC_end
         (916 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1758                                                        1320   0.0  

>3x_Contig1758 
          Length = 25930

 Score = 1320 bits (666), Expect = 0.0
 Identities = 792/821 (96%), Gaps = 11/821 (1%)
 Strand = Plus / Minus

                                                                         
Query: 87    ggatgagaagtagtagaagagtacccagtacttttactagcttgatattatacgtttcaa 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13533 ggatgagaagtagtagaagagtacccagtacttttactagcttgatattatacgtttcaa 13474

                                                                         
Query: 147   ccgatccttgatgaatggcttcatcgttatttatcagattagattttgtaacttgtggaa 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13473 ccgatccttgatgaatggcttcatcgttatttatcagattagattttgtaacttgtggaa 13414

                                                                         
Query: 207   tggttgtattttttttttgctttgtcaattcatcgtgcttcgctttggccagcttgagca 266
             |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13413 tggttgtatcatttttttgctttgtcaattcatcgtgcttcgctttggccagcttgagca 13354

                                                                         
Query: 267   aagtgttatcagaatcctgttcatttttcttaatggctccggcagtgacacggtcgtcat 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13353 aagtgttatcagaatcctgttcatttttcttaatggctccggcagtgacacggtcgtcat 13294

                                                                         
Query: 327   caggaactaagttttgaa-cgttaccgaaaaagtcagtgattagtacatcag-atagatt 384
             |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 13293 caggaactaagttttgaagcgttaccgaaaaagtcagtgattagtacatcagtatagatt 13234

                                                                         
Query: 385   tcttgggtatagatctgtcctaacaccaacatgtgaatggactttttcaaatgtgtacga 444
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13233 tcttgggtatagatctgtcctaacaccaacatgtgaatggactttttcaaatgtgtacga 13174

                                                                         
Query: 445   atcgaaaagat-ca-cgcaaagtcagtgtagagttcttatcaatttcttccataaaacct 502
             ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13173 atcgaaaagatgcagcgcaaagtcagtgtagagttcttatcaatttcttccataaaacct 13114

                                                                         
Query: 503   aaagtgtaatacgtgaatctatcgacgacagcaacaccgagttcgacatctgaatggtga 562
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13113 aaagtgtaatacgtgaatctatcgacgacagcaacaccgagttcgacatctgaatggtga 13054

                                                                         
Query: 563   gaatacgaactttcgtccagttcactagatccaacagcaattacattgggcgaatagaac 622
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13053 gaatacgaactttcgtccagttcactagatccaacagcaattacattgggcgaatagaac 12994

                                                                         
Query: 623   tttgaaaacatagtgttcgcttgacatgtatcaatcataaaaaacatttcattataacgt 682
             |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 12993 tttgaaaacatagtgttcgcttgacatgtatcaatcataaaaaacaattcattataacgt 12934

                                                                         
Query: 683   tttttggcatgcatttgagccaatgcattggcgatgtcatgactgggcatcttctctgca 742
             |||||||||||||||||||||||||||| |||||||||||||||||  |||| |||||||
Sbjct: 12933 tttttggcatgcatttgagccaatgcatcggcgatgtcatgactggcaatctcctctgca 12874

                                                                         
Query: 743   tctttgaacttcaagaaatctt-accaccatgttcagtcaaattaatgaaaacattggaa 801
             |||| ||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||
Sbjct: 12873 tcttggaacttcaagaaatcttcaccaccatgtccagtcaaataaatgaaaacattggaa 12814

                                                                         
Query: 802   ttctcatccggtcatcaatctcctttgatttggggatgattcttattcccatttatcagg 861
             ||||||||  ||||||||||| ||||||||| ||||||| ||||  |||||| |||||| 
Sbjct: 12813 ttctcatc--gtcatcaatct-ctttgattt-gggatga-tcttcatcccatctatcagt 12759

                                                      
Query: 862   caataatttaataaaatttttcactgtggatttcataccct 902
             ||||||| |||||||||| | |||||| || ||||||||||
Sbjct: 12758 caataatctaataaaattctccactgt-gacttcataccct 12719


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8322
Number of Sequences: 1807
Number of extensions: 8322
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)