BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC31ZH11FM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1758 1320 0.0 >3x_Contig1758 Length = 25930 Score = 1320 bits (666), Expect = 0.0 Identities = 792/821 (96%), Gaps = 11/821 (1%) Strand = Plus / Minus Query: 87 ggatgagaagtagtagaagagtacccagtacttttactagcttgatattatacgtttcaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13533 ggatgagaagtagtagaagagtacccagtacttttactagcttgatattatacgtttcaa 13474 Query: 147 ccgatccttgatgaatggcttcatcgttatttatcagattagattttgtaacttgtggaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13473 ccgatccttgatgaatggcttcatcgttatttatcagattagattttgtaacttgtggaa 13414 Query: 207 tggttgtattttttttttgctttgtcaattcatcgtgcttcgctttggccagcttgagca 266 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13413 tggttgtatcatttttttgctttgtcaattcatcgtgcttcgctttggccagcttgagca 13354 Query: 267 aagtgttatcagaatcctgttcatttttcttaatggctccggcagtgacacggtcgtcat 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13353 aagtgttatcagaatcctgttcatttttcttaatggctccggcagtgacacggtcgtcat 13294 Query: 327 caggaactaagttttgaa-cgttaccgaaaaagtcagtgattagtacatcag-atagatt 384 |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 13293 caggaactaagttttgaagcgttaccgaaaaagtcagtgattagtacatcagtatagatt 13234 Query: 385 tcttgggtatagatctgtcctaacaccaacatgtgaatggactttttcaaatgtgtacga 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13233 tcttgggtatagatctgtcctaacaccaacatgtgaatggactttttcaaatgtgtacga 13174 Query: 445 atcgaaaagat-ca-cgcaaagtcagtgtagagttcttatcaatttcttccataaaacct 502 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13173 atcgaaaagatgcagcgcaaagtcagtgtagagttcttatcaatttcttccataaaacct 13114 Query: 503 aaagtgtaatacgtgaatctatcgacgacagcaacaccgagttcgacatctgaatggtga 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13113 aaagtgtaatacgtgaatctatcgacgacagcaacaccgagttcgacatctgaatggtga 13054 Query: 563 gaatacgaactttcgtccagttcactagatccaacagcaattacattgggcgaatagaac 622 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13053 gaatacgaactttcgtccagttcactagatccaacagcaattacattgggcgaatagaac 12994 Query: 623 tttgaaaacatagtgttcgcttgacatgtatcaatcataaaaaacatttcattataacgt 682 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 12993 tttgaaaacatagtgttcgcttgacatgtatcaatcataaaaaacaattcattataacgt 12934 Query: 683 tttttggcatgcatttgagccaatgcattggcgatgtcatgactgggcatcttctctgca 742 |||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| Sbjct: 12933 tttttggcatgcatttgagccaatgcatcggcgatgtcatgactggcaatctcctctgca 12874 Query: 743 tctttgaacttcaagaaatctt-accaccatgttcagtcaaattaatgaaaacattggaa 801 |||| ||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| Sbjct: 12873 tcttggaacttcaagaaatcttcaccaccatgtccagtcaaataaatgaaaacattggaa 12814 Query: 802 ttctcatccggtcatcaatctcctttgatttggggatgattcttattcccatttatcagg 861 |||||||| ||||||||||| ||||||||| ||||||| |||| |||||| |||||| Sbjct: 12813 ttctcatc--gtcatcaatct-ctttgattt-gggatga-tcttcatcccatctatcagt 12759 Query: 862 caataatttaataaaatttttcactgtggatttcataccct 902 ||||||| |||||||||| | |||||| || |||||||||| Sbjct: 12758 caataatctaataaaattctccactgt-gacttcataccct 12719 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8322 Number of Sequences: 1807 Number of extensions: 8322 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)