BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZA11RM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1392 1170 0.0 >3x_Contig1392 Length = 9092 Score = 1170 bits (590), Expect = 0.0 Identities = 621/629 (98%), Gaps = 2/629 (0%) Strand = Plus / Minus Query: 50 atcctgtgttcagtttctccactatttcattcgataaaggagagtatagccatatttccc 109 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5552 atcctgtgttcagtttcgccactatttcattcgataaaggagagtatagccatatttccc 5493 Query: 110 ctaggtttagacccagaactaccaatggtgtgtcattgtaagtaatccattgtatgcatg 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5492 ctaggtttagacccagaactaccaatggtgtgtcattgtaagtaatccattgtatgcatg 5433 Query: 170 tacagcagacgtctttcccctccaaatagagaaaattatcgttcactattccagatttgg 229 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 5432 tacagcagacgtctttcccctccaaatagagaaaattatcgttcactaaaccagatttgg 5373 Query: 230 aggcagttgttggctccactgatacccgctgtttatccaaagcggtggaaacgtatgcaa 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5372 aggcagttgttggctccactgatacccgctgtttatccaaagcggtggaaacgtatgcaa 5313 Query: 290 aatattgtccggttggatcatattgtgataatacgactggcgaagctgttgccatcgtta 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5312 aatattgtccggttggatcatattgtgataatacgactggcgaagctgttgccatcgtta 5253 Query: 350 agcttgctattgttattcgtgtggtagagtgtagacctctagcttaaacagtacgaaagc 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5252 agcttgctattgttattcgtgtggtagagtgtagacctctagcttaaacagtacgaaagc 5193 Query: 410 cggtgattgttcaattaatatcccaagacgttttatcgaaacactttaggaaagaagtaa 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5192 cggtgattgttcaattaatatcccaagacgttttatcgaaacactttaggaaagaagtaa 5133 Query: 470 gtacacaaaagtaaatactgtgcgatgagctcagatgagatgcgatgagatgagctatga 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5132 gtacacaaaagtaaatactgtgcgatgagctcagatgagatgcgatgagatgagctatga 5073 Query: 530 aaagtttcaaatgaaaagctttagcttggaaaggagaaagaaaagtgagattttacttac 589 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 5072 aaagtttcaaatgaaaagctttagcttggaaaggagaaagaaaagtgaga-tttacttac 5014 Query: 590 -aaaaacaagtgccnggtaataagaagttagcatatattgttcacgtgatttggagcata 648 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5013 aaaaaacaagtgccgggtaataagaagttagcatatattgttcacgtgatttggagcata 4954 Query: 649 tagccagtggtccccaattttaagctttt 677 |||||||||||||||||||| | |||||| Sbjct: 4953 tagccagtggtccccaatttaaggctttt 4925 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7327 Number of Sequences: 1807 Number of extensions: 7327 Number of successful extensions: 227 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)