BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC32ZB01FM1.SCF screened BAC_end
         (933 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1512                                                        1142   0.0  

>3x_Contig1512 
          Length = 8803

 Score = 1142 bits (576), Expect = 0.0
 Identities = 578/579 (99%)
 Strand = Plus / Minus

                                                                       
Query: 88  tacaaacaaagaaaattcgatgaagctattgaaaaatacaatgaagcttgggaaactcat 147
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tacaaacaaagaaaattcgatgaagctattgaaaaatacaatgaagcttgggaaactcat 520

                                                                       
Query: 148 aatgacatcacgtatctaaacaaccgtgctgcagcagaatatgaaaaaggtgattacgag 207
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aatgacatcacgtatctaaacaaccgtgctgcagcagaatatgaaaaaggtgattacgag 460

                                                                       
Query: 208 gcagccatcgaaactctaacaaaggctgtggaacaaggtagagaactcagagctgattac 267
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gcagccatcgaaactctaacaaaggctgtggaacaaggtagagaactcagagctgattac 400

                                                                       
Query: 268 aaagtcatttcaaaatctttcgctcgtatgggtaactcttaccacaagcttggcgattta 327
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aaagtcatttcaaaatctttcgctcgtatgggtaactcttaccacaagcttggcgattta 340

                                                                       
Query: 328 aagaaggctatcgactactatgaaaaatctctaactgaacatcgtaccccagatatctta 387
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aagaaggctatcgactactatgaaaaatctctaactgaacatcgtaccccagatatctta 280

                                                                       
Query: 388 acgaaattaagaaacacagaaaaggaactcaagcaaaaggaagcagaatcttacatggac 447
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 acgaaattaagaaacacagaaaaggaactcaagcaaaaggaagcagaatcttacatggac 220

                                                                       
Query: 448 cctgaaaaggcagaagaagctagattacaaggtaaggaatacttcactaaggctgactgg 507
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 cctgaaaaggcagaagaagctagattacaaggtaaggaatacttcactaaggctgactgg 160

                                                                       
Query: 508 ccaaaggctgtcgaagcatacactgaaatgatcaaaagaaatccaaacgatgccagaggt 567
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 ccaaaggctgtcgaagcatacactgaaatgatcaaaagaaatccaaacgatgccagaggt 100

                                                                       
Query: 568 tactctaacagagctgcagctctatctaagttgatgtcattcgctgacgccattagagac 627
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99  tactctaacagagctgcagctctatctaagttgatgtcattcgctgacgccattagagac 40

                                                  
Query: 628 tgtgacanagccatcgagaaagatccaaactttgtcaga 666
           ||||||| |||||||||||||||||||||||||||||||
Sbjct: 39  tgtgacaaagccatcgagaaagatccaaactttgtcaga 1


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6602
Number of Sequences: 1807
Number of extensions: 6602
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 933
length of database: 10,358,551
effective HSP length: 16
effective length of query: 917
effective length of database: 10,329,639
effective search space: 9472278963
effective search space used: 9472278963
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)