BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZB01RM1.SCF screened BAC_end (989 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1801 1053 0.0 >3x_Contig1801 Length = 57606 Score = 1053 bits (531), Expect = 0.0 Identities = 552/558 (98%), Gaps = 1/558 (0%) Strand = Plus / Plus Query: 44 cttagcctttgaatgaaaacatcttcttgcttcctatgcacagccttgcgctctagttcc 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48057 cttagcctttgaatgaaaacatcttcttgcttcctatgcacagccttgcgctctagttcc 48116 Query: 104 aaggatttttccatggtatcaagagccttcaacttcaaatcgacttttgttagttgagta 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48117 aaggatttttccatggtatcaagagccttcaacttcaaatcgacttttgttagttgagta 48176 Query: 164 ttgattaaatcatttgtcgtcctattcatcaatttttcttggttggtagcgaatacatga 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48177 ttgattaaatcatttgtcgtcctattcatcaatttttcttggttggtagcgaatacatga 48236 Query: 224 gagcgtagccccaaggtagctagagcgacttctgtgccgtccttcactgttattctagca 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48237 gagcgtagccccaaggtagctagagcgacttctgtgccgtccttcactgttattctagca 48296 Query: 284 tcagattcagcatttgtgaccgttactgcttgttcttctggcagctcttgtttttccgat 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48297 tcagattcagcatttgtgaccgttactgcttgttcttctggcagctcttgtttttccgat 48356 Query: 344 ggtgtttccttgtttgataatgcttcattctctaaagattcttcttgatgaggttcttcc 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48357 ggtgtttccttgtttgataatgcttcattctctaaagattcttcttgatgaggttcttcc 48416 Query: 404 actggaatcgcttcttcttgactaccttcctctttattcttttcttccgctttttgtagc 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48417 actggaatcgcttcttcttgactaccttcctctttattcttttcttccgctttttgtagc 48476 Query: 464 ccttcttctcctgttttttcagctcttacttctgttgcttctttttcttcattctctggn 523 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48477 ccttcttctcctgttttttcagctcttacttctgttgcttctttttcttcattctctggt 48536 Query: 524 gtatttgcatttttcctcatttgaagtgtcaacagttacatttgaatttgctactttgtc 583 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 48537 gtatttgcattttt-ctcatttgaagtgtcaacagttacatctgaatttgctacttgttc 48595 Query: 584 tgctgctggaacagttcc 601 |||||||||| ||||||| Sbjct: 48596 tgctgctggagcagttcc 48613 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,616 Number of Sequences: 1807 Number of extensions: 11616 Number of successful extensions: 74 Number of sequences better than 1.0e-20: 1 length of query: 989 length of database: 10,358,551 effective HSP length: 16 effective length of query: 973 effective length of database: 10,329,639 effective search space: 10050738747 effective search space used: 10050738747 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)