BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZB05FM1.SCF screened BAC_end (906 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig524 1481 0.0 >3x_Contig524 Length = 2067 Score = 1481 bits (747), Expect = 0.0 Identities = 771/778 (99%), Gaps = 1/778 (0%) Strand = Plus / Plus Query: 85 ttttttattcgtttcgactgtacgggtcgagcgattcgcgggttgctataccgttgtatt 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 ttttttattcgtttcgactgtacgggtcgagcgattcgcgggttgctataccgttgtatt 482 Query: 145 tatctcatagatatgctagcgcatagtaagtgcgccatcacaaatctgctgaaaaaacct 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 tatctcatagatatgctagcgcatagtaagtgcgccatcacaaatctgctgaaaaaacct 542 Query: 205 gttttggcgacgggagaatacgacatagcagatgagattgatggaggcgatgaggtgtat 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 543 gttttggcgacgggagaatacgacatagcagatgagattgatggaggcgatgaggtgtat 602 Query: 265 aggtgttcaaacgacggaaaagggtgggggcacgtgatgcgtgggaatgatgcggacatt 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 aggtgttcaaacgacggaaaagggtgggggcacgtgatgcgtgggaatgatgcggacatt 662 Query: 325 gtcaatttttctgttattccggtgtgatacctaaataatccgggtaacgtaaagcgctga 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 663 gtcaatttttctgttattccggtgtgatacctaaataatccgggtaacgtaaagcgctga 722 Query: 385 cagatgtcagcgccttagaatgttgttagatggtattattgtgtatatcatcattgaacg 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 cagatgtcagcgccttagaatgttgttagatggtattattgtgtatatcatcattgaacg 782 Query: 445 acagaggtataaggttcgtcagttgctgagtaacgctgaaatttcaatggatacggcgtc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 783 acagaggtataaggttcgtcagttgctgagtaacgctgaaatttcaatggatacggcgtc 842 Query: 505 accacttttactgtgggcagaacagttatgtcttcgggtacccttgacccaattgttctt 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 843 accacttttactgtgggcagaacagttatgtcttcgggtacccttgacccaattgttctt 902 Query: 565 cctggcggttgttgggcacttgctagtgttaaccgtactttgtttctccccatggttgtc 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 903 cctggcggttgttgggcacttgctagtgttaaccgtactttgtttctccccatggttgtc 962 Query: 625 gtgtatagaataccgcattcgtaattggtaggtttttttagtgggctgggaccccatgca 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 963 gtgtatagaataccgcattcgtaattggtaggtttttttagtgggctgggaccccatgca 1022 Query: 685 gcttgggaaaggttatgactggtgagtagtatccaatctggtcgcttgagtgtattttca 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1023 gcttgggaaaggttatgactggtgagtagtatccaatctggtcgcttgagtgtattttca 1082 Query: 745 tctgggaattgtatat-atatttggtatggcttggaatcatatgcctattcttatcggac 803 |||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1083 tctgtgaattgtatataatatttggtatggcttggaaccatatgcctattcttatcggac 1142 Query: 804 tgtgtcgcgtttgttggcagaaggacatgttttcttaaaacaggcactactttnctct 861 ||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||| Sbjct: 1143 tgtgtcgcgtttgttggcagagggacatgttttcttaaacaaggcactactttcctct 1200 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5058 Number of Sequences: 1807 Number of extensions: 5058 Number of successful extensions: 27 Number of sequences better than 1.0e-20: 1 length of query: 906 length of database: 10,358,551 effective HSP length: 16 effective length of query: 890 effective length of database: 10,329,639 effective search space: 9193378710 effective search space used: 9193378710 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)