BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZB12FM1.SCF screened BAC_end (958 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1642 1132 0.0 >3x_Contig1642 Length = 16641 Score = 1132 bits (571), Expect = 0.0 Identities = 614/628 (97%), Gaps = 1/628 (0%) Strand = Plus / Minus Query: 84 tgagcgaagtgattttctgtttaaagttccaacgaaatcagaggcaaccagttggttgaa 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12559 tgagcgaagtgattttctgtttaaagttccaacgaaatcagaggcaaccagttggttgaa 12500 Query: 144 gttaagtcccaaatcagagtgatttgcatcaaggatttgaagagctcgttttgtttctga 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12499 gttaagtcccaaatcagagtgatttgcatcaaggatttgaagagctcgttttgtttctga 12440 Query: 204 atcagatgtgtattctgtttaattgggaacattcaataagctgttaatcttcttggataa 263 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 12439 atcagatgtgtaactcgcataattgggaacattcaataagctgttaatcttcttggataa 12380 Query: 264 aagttggtttgtagttgtaggtttctcgatgttatttgatataggagctgcgacctcctt 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12379 aagttggtttgtagttgtaggtttctcgatgttatttgatataggagctgcgacctcctt 12320 Query: 324 cgataaagagacggacgcatggcgtatttcaccgagggaaatgctggcaaaatgtttcat 383 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 12319 cgataaagagacggacgcagggcgtatttcaccgagggaaatgctggcaaaatgtttcat 12260 Query: 384 cttgctgtgaagatcggtaaactcggtgtcatgcttgctgacattcggtagaacgaattt 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12259 cttgctgtgaagatcggtaaactcggtgtcatgcttgctgacattcggtagaacgaattt 12200 Query: 444 ggcctcttgttcatcgtcattcaatctcaagcttgccaacgaaagacgtgacgctggttg 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12199 ggcctcttgttcatcgtcattcaatctcaagcttgccaacgaaagacgtgacgctggttg 12140 Query: 504 aggtaatgcagcagactcgtccactaccagtgccggnaaatctagaaagtccattacaga 563 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 12139 aggtaatgcagcagactcgtccactaccagtgccggaaaatctagaaagtccattacaga 12080 Query: 564 tatgagatctgctatttataattgagtgncatgattagttagtatgtcagaatcctgatt 623 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12079 tatgagatctgctatttataattgagtgcaatgattagttagtatgtcagaatcctgatt 12020 Query: 624 tcgcgagtagttaaatgtctcttt-atacaatttgnatgactttctttttcgaaaaatga 682 |||||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| Sbjct: 12019 tcgcgagtagtttaatgtctctttaatacaatttgtatgactttctatttcgaaaaatga 11960 Query: 683 aagatttaggtttttcgtatttattgaa 710 |||||||||||||||||||||||||||| Sbjct: 11959 aagatttaggtttttcgtatttattgaa 11932 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7530 Number of Sequences: 1807 Number of extensions: 7530 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 958 length of database: 10,358,551 effective HSP length: 16 effective length of query: 942 effective length of database: 10,329,639 effective search space: 9730519938 effective search space used: 9730519938 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)