BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZC03RM1.SCF screened BAC_end (933 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1227 1487 0.0 >3x_Contig1227 Length = 6330 Score = 1487 bits (750), Expect = 0.0 Identities = 851/873 (97%), Gaps = 11/873 (1%) Strand = Plus / Minus Query: 44 ctttttcttccattcaactaatctagcaaaatcttggttttcttcattacctgaatggga 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3377 ctttttcttccattcaactaatctagcaaaatcttggttttcttcattacctgaatggga 3318 Query: 104 tacgtcccaggatcctacagtcattaatccattcaaactaacatgcttggcctccttgat 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3317 tacgtcccaggatcctacagtcattaatccattcaaactaacatgcttggcctccttgat 3258 Query: 164 aagatattcaacaatcgaatacacctctacttctgcgaacaatccggatttttgttcctc 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3257 aagatattcaacaatcgaatacacctctacttctgcgaacaatccggatttttgttcctc 3198 Query: 224 tccagaagtgttgatctgaacattacacgtgatcacgggtgcatccgggttccacttccc 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3197 tccagaagtgttgatctgaacattacacgtgatcacgggtgcatccgggttccacttccc 3138 Query: 284 tctggcttcttccaacttcttcgccttctttaacgaatcaacggtctctaccgagtaaag 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3137 tctggcttcttccaacttcttcgccttctttaacgaatcaacggtctctaccgagtaaag 3078 Query: 344 gttcgcaatcttagccaaatccttgcatttgttactttgcaaaccgccgatgaaatgcca 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3077 gttcgcaatcttagccaaatccttgcatttgttactttgcaaaccgccgatgaaatgcca 3018 Query: 404 tttaatatcctggggtaaaatctcactcttcgtaatcatctcttgaacgtagttttcccc 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3017 tttaatatcctggggtaaaatctcactcttcgtaatcatctcttgaacgtagttttcccc 2958 Query: 464 aaagtgtctcacaccataatcatacaaaattttgatgtctgcagcaggcttatacttgga 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2957 aaagtgtctcacaccataatcatacaaaattttgatgtctgcagcaggcttatacttgga 2898 Query: 524 aacagctagtaattcaacgttaacattaccgacttcctgagcagtggcattgatcttatc 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2897 aacagctagtaattcaacgttaacattaccgacttcctgagcagtggcattgatcttatc 2838 Query: 584 tttcatcgtctgataagccccaatcagctcttctttcctcacagcatcgtaactgatatc 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2837 tttcatcgtctgataagccccaatcagctcttctttcctcacagcatcgtaactgatatc 2778 Query: 644 actagacattcttcttgctactatcagtcccctgcgaatcattcanaagcactanntata 703 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 2777 actagacattcttcttgctactatcagtcccctgcgaatcattcaaaagcactata-ata 2719 Query: 704 tgggt-aaaccaaaatttaaagtaagtgctcatcacttaatcttattcagatgttgtgaa 762 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2718 tgggtaaaaccaaaatttaaagtaagtgctcatcacttaatctta-tcagatgttgtgaa 2660 Query: 763 tcatcgagcanattcctttatttcttgaagccgtttctgggaaaaaggtg-tgatacttg 821 |||||||||| |||||||||| ||||||||||| |||| ||||||| ||| ||||||||| Sbjct: 2659 tcatcgagcaaattcctttatatcttgaagccg-ttcttggaaaaaagtgttgatacttg 2601 Query: 822 tcacgtgatgtaggggagctgc-aaaaagac-attcgaaaatgtaa--gagc-aaacgcg 876 |||||||||||||||||||||| |||||||| | ||||||||| || ||| ||||||| Sbjct: 2600 tcacgtgatgtaggggagctgcaaaaaagacaaatcgaaaatggaaagaagcaaaacgcg 2541 Query: 877 attaaaattcattg-attgaaacgggattggtt 908 ||||||||||| || |||||||||||||||||| Sbjct: 2540 attaaaattcaatgaattgaaacgggattggtt 2508 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6560 Number of Sequences: 1807 Number of extensions: 6560 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 933 length of database: 10,358,551 effective HSP length: 16 effective length of query: 917 effective length of database: 10,329,639 effective search space: 9472278963 effective search space used: 9472278963 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)