BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZC05FM1.SCF screened BAC_end (938 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1758 1219 0.0 >3x_Contig1758 Length = 25930 Score = 1219 bits (615), Expect = 0.0 Identities = 694/713 (97%), Gaps = 7/713 (0%) Strand = Plus / Plus Query: 86 cactatcaagagtcagattctcatcattcatcagatcggcagatcccatagtacctcgtt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3626 cactatcaagagtcagattctcatcattcatcagatcggcagatcccatagtacctcgtt 3685 Query: 146 taggcttgaagtttttattgattattgtttgattccatatatccataatttgatcaaatg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3686 taggcttgaagtttttattgattattgtttgattccatatatccataatttgatcaaatg 3745 Query: 206 tactgtcccttgatatgaaagatgcaaacaggaacttgtcatgtaaggtttgtatcgata 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3746 tactgtcccttgatatgaaagatgcaaacaggaacttgtcatgtaaggtttgtatcgata 3805 Query: 266 tggcattaggaaataatacggcagtgttcttttgttcgatctgaactatctctttgaatg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3806 tggcattaggaaataatacggcagtgttcttttgttcgatctgaactatctctttgaatg 3865 Query: 326 gaactacaacagtcttcatccatcccaaaatattcgagtaaaagcaaatgtgtctatcag 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3866 gaactacaacagtcttcatccatcccaaaatattcgagtaaaagcaaatgtgtctatcag 3925 Query: 386 atatgtataacctaccttgaatgagaatatcttttgataaagcacaactgtaatccgcta 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3926 atatgtataacctaccttgaatgagaatatcttttgataaagcacaactgtaatccgcta 3985 Query: 446 ttaatctttcaattggagatactacggtgtctttaaagattgtatggaaatctgtattac 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3986 ttaatctttcaattggagatactacggtgtctttaaagattgtatggaaatctgtattac 4045 Query: 506 gcttagcacttgcatattcaatgcnctgaagttctggttcttcagtttttctctttatt- 564 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4046 gcttagcacttgcatattcaatgccttgaagttctggttcttcagtttttctctttattg 4105 Query: 565 gaatgtccgaagttgacaggcgtgttggtcctccaggtggttgaacaatatcactggtct 624 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4106 gaatgtccgaagttgacaggcgtgttggtcctccaggtggttgaaaaatatcactggtct 4165 Query: 625 t-gatatgctactcgctcttgtcatgtttctgcccg-aaatgaaattcttaggggtgctg 682 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 4166 tggatatgctactcgctcttgtcatgtttctgcccgaaaatgaatttcttaggggtgctg 4225 Query: 683 taaataatttcgtaactgcagcaagcgacaatgatcttataattaaatctttcaacactt 742 |||||||||||||| |||||||| ||||||||||||| ||| |||||||| ||||||||| Sbjct: 4226 taaataatttcgtagctgcagcaggcgacaatgatctcatagttaaatctctcaacactt 4285 Query: 743 cgggggcgttttgacccttaccgttcctcggccttaattttttccaatgaagg 795 | ||||||| |||||| ||||||||||||||| || ||||||| |||||||| Sbjct: 4286 c-ggggcgtcttgacc--taccgttcctcggcc-tagttttttcgaatgaagg 4334 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6931 Number of Sequences: 1807 Number of extensions: 6931 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 938 length of database: 10,358,551 effective HSP length: 16 effective length of query: 922 effective length of database: 10,329,639 effective search space: 9523927158 effective search space used: 9523927158 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)